RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ELK3P41970 407 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 ARL4CP56559 192 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 CCL7P80098 99 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 FOXK2Q01167 660 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 MRNIPQ6NTE8 343 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 CILP2Q8IUL8 1156 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 CCNJLQ8IV13 435 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 CFAP206Q8IYR0 622 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 GALNT15Q8N3T1 639 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 SEC14L1Q92503 715 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 ART4Q93070 314 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 LRRC39Q96DD0 335 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 NAT9Q9BTE0 207 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 RAB17Q9H0T7 212 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 COG4Q9H9E3 785 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 CPNE7Q9UBL6 633 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 FAM8A1Q9UBU6 413 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 ACSL5Q9ULC5 683 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 PSMD13Q9UNM6 376 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 UTP11Q9Y3A2 253 aaKnown RBP21.92■■□□□ 1.1
PTCD3-203ENST00000409783 NEUROG3Q9Y4Z2 214 aa21.92■■□□□ 1.1
PTCD3-203ENST00000409783 PRAMEF33A0A0G2JMD5 474 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 FAM149AA5PLN7 773 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 RHPN2P1A8MT19 583 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 PRMT5O14744 637 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-203ENST00000409783 TTC4O95801 387 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 MT-CO3P00414 261 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 GSTM1P09488 218 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 RPS3P23396 243 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■■□□□ 12.1
PTCD3-203ENST00000409783 GPR3P46089 330 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 OR1D5P58170 312 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 SLC7A5Q01650 507 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 GSTM4Q03013 218 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 HHEXQ03014 270 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 CALCOCO2Q13137 446 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 FASTKD3Q14CZ7 662 aaKnown RBP21.91■■□□□ 1.1
PTCD3-203ENST00000409783 LONRF1Q17RB8 773 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 HP1BP3Q5SSJ5 553 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-203ENST00000409783 STEAP4Q687X5 459 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 C8orf74Q6P047 294 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 ZDHHC24Q6UX98 284 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 SLC9B2Q86UD5 537 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 ZNF761Q86XN6 746 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-203ENST00000409783 DCBLD1Q8N8Z6 715 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 Q8N9G6 341 aaPredicted RBP21.91■■□□□ 1.1
PTCD3-203ENST00000409783 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.91■■□□□ 1.1
PTCD3-203ENST00000409783 MNS1Q8NEH6 495 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 LKAAEAR1Q8TD35 194 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 LPGAT1Q92604 370 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 BIRC8Q96P09 236 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 TCF12Q99081 682 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 ABCG4Q9H172 646 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 LRRN3Q9H3W5 708 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 CHMP2BQ9UQN3 213 aa21.91■■□□□ 1.1
PTCD3-203ENST00000409783 CTAGE15A4D2H0 777 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 NDUFS3O75489 264 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 S1PR4O95977 384 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 RPLP0P05388 317 aaKnown RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 OR56A5P0C7T3 313 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CTAGE8P0CG41 777 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 PDX1P52945 283 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 RPE65Q16518 533 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 ZNF789Q5FWF6 425 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 SPANXN3Q5MJ09 141 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CAPRIN2Q6IMN6 1127 aaKnown RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CCNI2Q6ZMN8 369 aaPredicted RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 UNC5AQ6ZN44 842 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 SDCCAG8Q86SQ7 713 aaPredicted RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CTAGE6Q86UF2 777 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 DENND6AQ8IWF6 608 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CTAGE4Q8IX94 777 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 SPDYE1Q8NFV5 336 aaPredicted RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 WDR48Q8TAF3 677 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 RMDN2Q96LZ7 410 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 INSM2Q96T92 566 aaPredicted RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CARD6Q9BX69 1037 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 WWP1Q9H0M0 922 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 OR52A5Q9H2C5 316 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 VPS37BQ9H9H4 285 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 C20orf96Q9NUD7 363 aaPredicted RBP21.9■■□□□ 1.1
PTCD3-203ENST00000409783 ANGPTL2Q9UKU9 493 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 CLCA2Q9UQC9 943 aa21.9■■□□□ 1.1
PTCD3-203ENST00000409783 IGHV1OR21-1A0A087WYE8 117 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 TCEA3O75764 348 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 FTH1P02794 183 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 F7P08709 466 aaPredicted RBP21.89■■□□□ 1.09
PTCD3-203ENST00000409783 PDHA2P29803 388 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 ADARP55265 1226 aaKnown RBP21.89■■□□□ 1.09
PTCD3-203ENST00000409783 PDIA2Q13087 525 aaKnown RBP21.89■■□□□ 1.09
PTCD3-203ENST00000409783 CAMK2BQ13554 666 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 CTSL3PQ5NE16 218 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 ZNF470Q6ECI4 717 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 LRRC6Q86X45 466 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 OTUD6BQ8N6M0 293 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 AVL9Q8NBF6 648 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 UCK1Q9HA47 277 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 POT1Q9NUX5 634 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 DMGDHQ9UI17 866 aaKnown RBP21.89■■□□□ 1.09
PTCD3-203ENST00000409783 MSRB2Q9Y3D2 182 aa21.89■■□□□ 1.09
PTCD3-203ENST00000409783 AKAP13Q12802 2813 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms