RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SLC51BQ86UW2 128 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 C1QL4Q86Z23 238 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CTAGE3PQ8IX95 158 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 GALNT4Q8N4A0 578 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CPSF7Q8N684 471 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 SNX31Q8N9S9 440 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ETNPPLQ8TBG4 499 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 RAB2BQ8WUD1 216 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 GIMAP1Q8WWP7 306 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ST8SIA2Q92186 375 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CELF1Q92879 486 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 TOP1MTQ969P6 601 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 DNAJC19Q96DA6 116 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TXNDC15Q96J42 360 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZNF597Q96LX8 424 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 RIPOR3Q96MK2 946 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 COG8Q96MW5 612 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PAFAH2Q99487 392 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 DHRS9Q9BPW9 319 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 AIFM2Q9BRQ8 373 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 C17orf80Q9BSJ5 609 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 DCUN1D5Q9BTE7 237 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ANKRD60Q9BZ19 345 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FRMD8P1Q9BZ68 369 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 ARMC7Q9H6L4 198 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 RPAP3Q9H6T3 665 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 RPF2Q9H7B2 306 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 CERS4Q9HA82 394 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CXorf21Q9HAI6 301 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 MRGBPQ9NV56 204 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 HECAQ9UBI9 543 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 ARPP21Q9UBL0 812 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZMAT5Q9UDW3 170 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 AFF4Q9UHB7 1163 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 RIMS3Q9UJD0 308 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 DNAJC16Q9Y2G8 782 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CPQQ9Y646 472 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZHX2Q9Y6X8 837 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CLUHO75153 1309 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 LOC105371267A0A1B0GV96 52 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FAM237BA0A1B0GVD1 139 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ISPDA4D126 451 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 SMCO2A6NFE2 343 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 DBX1A6NMT0 343 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FOXO6A8MYZ6 492 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FAM25AB3EWG3 89 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FAM25CB3EWG5 89 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FAM25GB3EWG6 89 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 F5H6K3 240 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 IFRD1O00458 451 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 ACOX3O15254 700 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CLOCKO15516 846 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 SCO2O43819 266 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 KLHL41O60662 606 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TSPAN9O75954 239 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FYNP06241 537 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 LDHCP07864 332 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 INHBAP08476 426 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ADRB1P08588 477 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PROZP22891 400 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TCEA1P23193 301 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 KLRC2P26717 231 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 EEF1DP29692 281 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 RFC1P35251 1148 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 NUDT1P36639 197 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 BMXP51813 675 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 RABGGTBP53611 331 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 AQP5P55064 265 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ARHGAP8P85298 464 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZNF543Q08ER8 600 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ITGADQ13349 1161 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 GRM4Q14833 912 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 HERC3Q15034 1050 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ELAVL1Q15717 326 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 CYP2A13Q16696 494 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 SLC10A5Q5PT55 438 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TCHHL1Q5QJ38 904 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 C6orf52Q5T4I8 152 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 LDHAL6AQ6ZMR3 332 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZNF783Q6ZMS7 281 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 TAS2R42Q7RTR8 314 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ARID3BQ8IVW6 561 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 DEFB107AQ8IZN7 70 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 LCORLQ8N3X6 602 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 OR2C3Q8N628 320 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 LSMEM1Q8N8F7 131 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FEZF2Q8TBJ5 459 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 SLC35C1Q96A29 364 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 CCDC124Q96CT7 223 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZNF486Q96H40 463 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 PRR11Q96HE9 360 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 ZC3H10Q96K80 434 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 MSLNLQ96KJ4 702 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 MTMR9Q96QG7 549 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 BCL7BQ9BQE9 202 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 NUP85Q9BW27 656 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 DPH1Q9BZG8 443 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 INTS2Q9H0H0 1204 aaKnown RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 GSTO2Q9H4Y5 243 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms