RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ABHD14A-ACY1A0A1B0GW23 586 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 CXorf49A8MYA2 514 aaPredicted RBP17.97■□□□□ 0.47
COL18A1-204ENST00000400337 PRKCGP05129 697 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SLC25A11Q02978 314 aaKnown RBP17.97■□□□□ 0.47
COL18A1-204ENST00000400337 UBR7Q8N806 425 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 PSMA8Q8TAA3 256 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 AUTS2Q8WXX7 1259 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 MUC13Q9H3R2 512 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 PNPLA8Q9NP80 782 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 IGFBP5P24593 272 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 ITPKBP27987 946 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 ADSLP30566 484 aaPredicted RBP17.97■□□□□ 0.47
COL18A1-204ENST00000400337 TPGS2Q68CL5 300 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 CHST15Q7LFX5 561 aaPredicted RBP17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SH3RF2Q8TEC5 729 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SPEF2Q9C093 1822 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 ARVCFO00192 962 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SNPHO15079 494 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 C8GP07360 202 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 LAPTM5Q13571 262 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 KHDC1Q4VXA5 237 aaKnown RBP17.97■□□□□ 0.47
COL18A1-204ENST00000400337 OSTM1Q86WC4 334 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 LRRC15Q8TF66 581 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 SLC9A6Q92581 669 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 FANCEQ9HB96 536 aa17.97■□□□□ 0.47
COL18A1-204ENST00000400337 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-204ENST00000400337 OR1F1O43749 312 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 UGT2B11O75310 529 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 FABP3P05413 133 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 ADGRF1Q5T601 910 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 GPR135Q8IZ08 494 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 GLIS1Q8NBF1 620 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 SRFBP1Q8NEF9 429 aaKnown RBP17.96■□□□□ 0.47
COL18A1-204ENST00000400337 DCAKDQ8WVC6 231 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 CLEC4MQ9H2X3 399 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-204ENST00000400337 NCK1P16333 377 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 TLE2Q04725 743 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 UBXN11Q5T124 520 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 OR10A6Q8NH74 314 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 SLC45A1Q9Y2W3 748 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 YIPF1Q9Y548 306 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 TCEA3O75764 348 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 ZNF24P17028 368 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 EFNA1P20827 205 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-204ENST00000400337 PITRM1Q5JRX3 1037 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 ARMC3Q5W041 872 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 KRT77Q7Z794 578 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 SLC34A3Q8N130 599 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 CBR4Q8N4T8 237 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 OR52J3Q8NH60 311 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 Q9Y3F1 56 aa17.96■□□□□ 0.47
COL18A1-204ENST00000400337 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
COL18A1-204ENST00000400337 H3BNH8 94 aa17.96■□□□□ 0.46
COL18A1-204ENST00000400337 SLC31A1O15431 190 aa17.96■□□□□ 0.46
COL18A1-204ENST00000400337 KCNE1P15382 129 aa17.96■□□□□ 0.46
COL18A1-204ENST00000400337 MAT2AP31153 395 aaKnown RBP17.96■□□□□ 0.46
COL18A1-204ENST00000400337 MSANTD2Q6P1R3 559 aa17.96■□□□□ 0.46
COL18A1-204ENST00000400337 ZNF248Q8NDW4 579 aa17.96■□□□□ 0.46
COL18A1-204ENST00000400337 PSMD11O00231 422 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 CCR3P51677 355 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 PRMT2P55345 433 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 ATP13A5Q4VNC0 1218 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 PAQR3Q6TCH7 311 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 FAM98AQ8NCA5 519 aaKnown RBP17.95■□□□□ 0.46
COL18A1-204ENST00000400337 C11orf65Q8NCR3 313 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 ROPN1LQ96C74 230 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 PTPN18Q99952 460 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 RBM4BQ9BQ04 359 aaKnown RBP17.95■□□□□ 0.46
COL18A1-204ENST00000400337 RBM4Q9BWF3 364 aaKnown RBP17.95■□□□□ 0.46
COL18A1-204ENST00000400337 C1orf109Q9NX04 203 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 CMTM6Q9NX76 183 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 J3KR12 359 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 FADS2O95864 444 aaKnown RBP17.95■□□□□ 0.46
COL18A1-204ENST00000400337 UGT1A6P19224 532 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 UGT1A1P22309 533 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 UGT1A4P22310 534 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 UGT1A3P35503 534 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 UGT1A5P35504 534 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 HCAR3P49019 387 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 SLC9B1Q4ZJI4 515 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 NAPRTQ6XQN6 538 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 SNX20Q7Z614 316 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 LRTOMTQ8WZ04 291 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 NUSAP1Q9BXS6 441 aaKnown RBP17.95■□□□□ 0.46
COL18A1-204ENST00000400337 GDAP2Q9NXN4 497 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 SSR3Q9UNL2 185 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 GRB14Q14449 540 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 ZBTB6Q15916 424 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 POC5Q8NA72 575 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 PHC3Q8NDX5 983 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 ARNTL2Q8WYA1 636 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 LMLNQ96KR4 655 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 SIX4Q9UIU6 781 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 HS3ST4Q9Y661 456 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 TNFRSF11BO00300 401 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 NIPSNAP2O75323 286 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 PRPS2P11908 318 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 KCNJ11Q14654 390 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 FAM174BQ3ZCQ3 159 aa17.95■□□□□ 0.46
COL18A1-204ENST00000400337 VITQ6UXI7 678 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms