RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 TRIM64BA6NI03 449 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 CD3EAPO15446 510 aaKnown RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 KDM1AO60341 852 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 STC2O76061 302 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 LTA4HP09960 611 aaKnown RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 PSMA4P25789 261 aaKnown RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 POLR2IP36954 125 aaKnown RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 CAPGP40121 348 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 OR4D1Q15615 310 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 ATP6AP1Q15904 470 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 PLA2G4EQ3MJ16 856 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 ARMC12Q5T9G4 340 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 CUZD1Q86UP6 607 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 CENPNQ96H22 339 aaPredicted RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 ZFYVE19Q96K21 471 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 MRPL57Q9BQC6 102 aaKnown RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 POLR1EQ9GZS1 481 aaKnown RBP11.18□□□□□ -0.62
RCC1-204ENST00000398958 IGFLR1Q9H665 355 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 FANCEQ9HB96 536 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 AGPAT4Q9NRZ5 378 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 NSMCE4AQ9NXX6 385 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 SEPT3Q9UH03 358 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 BTRCQ9Y297 605 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 WDFY3Q8IZQ1 3526 aa11.18□□□□□ -0.62
RCC1-204ENST00000398958 CLPXO76031 633 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 GLP2RO95838 553 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 ALPIP09923 528 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CTNNB1P35222 781 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CCR2P41597 374 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 MLLT10P55197 1068 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 RPS3AP61247 264 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 TIAL1Q01085 375 aaKnown RBP eCLIP11.17□□□□□ -0.625e-7■■□□□ 14.4
RCC1-204ENST00000398958 POU4F1Q01851 419 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 GRSF1Q12849 480 aaKnown RBP eCLIP11.17□□□□□ -0.629e-7■■□□□ 12.1
RCC1-204ENST00000398958 GAREM2Q75VX8 874 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 BEND5Q7L4P6 421 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 PIWIL4Q7Z3Z4 852 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 APCDD1Q8J025 514 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CRIPAKQ8N1N5 446 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 MDGA1Q8NFP4 955 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 MAGEE2Q8TD90 523 aaPredicted RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 ZUFSPQ96AP4 578 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 SLC30A3Q99726 388 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 MRPL9Q9BYD2 267 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 TRIM15Q9C019 465 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 NANOGQ9H9S0 305 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CD320Q9NPF0 282 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 IFT80Q9P2H3 777 aaPredicted RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 RBMX2Q9Y388 322 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 NME4O00746 187 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 INSIG1O15503 277 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 AQP9O43315 295 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 B4GAT1O43505 415 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 SMAD6O43541 496 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 TLL1O43897 1013 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 IPO13O94829 963 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 PRAMEF12O95522 483 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 ATP5F1P24539 256 aaPredicted RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 HOXD9P28356 352 aaPredicted RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 OXTRP30559 389 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 LEPRP48357 1165 aaKnown RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 BCL2A1Q16548 175 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 PERM1Q5SV97 790 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 IRAK1BP1Q5VVH5 260 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CNKSR3Q6P9H4 555 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 SLC2A7Q6PXP3 512 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 ISCA2Q86U28 154 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 BBS7Q8IWZ6 715 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 DDIASQ8IXT1 998 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CMTM8Q8IZV2 173 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 AFAP1L2Q8N4X5 818 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 OR13F1Q8NGS4 319 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CCDC138Q96M89 665 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 HBEGFQ99075 208 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CINPQ9BW66 212 aaPredicted RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 LINC00597Q9H2U6 94 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 SMPD3Q9NY59 655 aaPredicted RBP11.17□□□□□ -0.62
RCC1-204ENST00000398958 SPG21Q9NZD8 308 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 HACD3Q9P035 362 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 CFAP97Q9P2B7 532 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 B3GNT3Q9Y2A9 372 aa11.17□□□□□ -0.62
RCC1-204ENST00000398958 IGLV3-10A0A075B6K4 115 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 MROH6A6NGR9 719 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 AQP12BA6NM10 295 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 H7C4K7 107 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 PRAMEF11O60813 436 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 RASAL1O95294 804 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 SOD2P04179 222 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 RHOCP08134 193 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 NFKBIAP25963 317 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 EEF1DP29692 281 aaKnown RBP11.16□□□□□ -0.62
RCC1-204ENST00000398958 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
RCC1-204ENST00000398958 HLCSP50747 726 aa11.16□□□□□ -0.62
RCC1-204ENST00000398958 CCT8P50990 548 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms