RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ALOX12P18054 663 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 GSTM2P28161 218 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 IL12AP29459 219 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 LEPRP48357 1165 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 NEK2P51955 445 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 KCTD2Q14681 263 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 TSNQ15631 228 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 CTF1Q16619 201 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 SGO1Q5FBB7 561 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 KIAA0319Q5VV43 1072 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 RSBN1Q5VWQ0 802 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ARMCX6Q7L4S7 300 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 AKAP14Q86UN6 197 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 TAC4Q86UU9 113 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 SDR39U1Q9NRG7 319 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 PCDHGA3Q9Y5H0 932 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ZNF638Q14966 1978 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ZNF99A8MXY4 864 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 GNRH1P01148 92 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 S100A1P23297 94 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 FMO4P31512 558 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 CLK1P49759 484 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 GEMP55040 296 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 DAOAP59103 153 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 DSC2Q02487 901 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 DGUOKQ16854 277 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 TTC23Q5W5X9 447 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 LBX2Q6XYB7 198 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 CYP2U1Q7Z449 544 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 COLGALT2Q8IYK4 626 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 FBXO39Q8N4B4 442 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 PDPRQ8NCN5 879 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 PNPT1Q8TCS8 783 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 UBE2FQ969M7 185 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 FAM162AQ96A26 154 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 GAD1Q99259 594 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 VAT1Q99536 393 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 CEP44Q9C0F1 390 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ADGRE2Q9UHX3 823 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ENPP5Q9UJA9 477 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ERVK-11Q9UQG0 969 aa9.76□□□□□ -0.85
PTCHD4-202ENST00000398738 ARVCFO00192 962 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CDC7O00311 574 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 SLC1A7O00341 560 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 UGT2B11O75310 529 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 PRKD3O94806 890 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CHEK2O96017 543 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ZNF37AP17032 561 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 TGM1P22735 817 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 HOXA11P31270 313 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CLCN5P51795 746 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 LILRA4P59901 499 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 DSC3Q14574 896 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 NKG7Q16617 165 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CILP2Q8IUL8 1156 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 PHACTR4Q8IZ21 702 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 SLC22A15Q8IZD6 547 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CLHC1Q8NHS4 586 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 B3GALT6Q96L58 329 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 UBXN10Q96LJ8 280 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CYP2S1Q96SQ9 504 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ASPSCR1Q9BZE9 553 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ABCG8Q9H221 673 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 AKIP1Q9NQ31 210 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ENTPD7Q9NQZ7 604 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 GMIPQ9P107 970 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 LEF1Q9UJU2 399 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ITGB1BP2Q9UKP3 347 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 B3GNT3Q9Y2A9 372 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ARL5AQ9Y689 179 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 LOC100506127A0A0U1RQW1 187 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 LOC100130705A0A1B0GUX0 176 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 SERTM1A2A2V5 107 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 TNPO2O14787 897 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ASNA1O43681 348 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 DFNA5O60443 496 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 RHOBTB1O94844 696 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 ANGPTL1O95841 491 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 SERPINH1P50454 418 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 EPS8Q12929 822 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CLN3Q13286 438 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 MADCAM1Q13477 382 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 RAPSNQ13702 412 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 MRPL58Q14197 206 aaKnown RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 NPTX1Q15818 432 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 KIAA0930Q6ICG6 404 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 TMC5Q6UXY8 1006 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 DET1Q7L5Y6 550 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 CNTN4Q8IWV2 1026 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 FAM83FQ8NEG4 500 aaPredicted RBP9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 MCFD2Q8NI22 146 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 SCAMP5Q8TAC9 235 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 HASPINQ8TF76 798 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 DMRTB1Q96MA1 342 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 SMOQ99835 787 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 HGH1Q9BTY7 390 aa9.75□□□□□ -0.85
PTCHD4-202ENST00000398738 TRIM54Q9BYV2 358 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms