RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 VIMP08670 466 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 HOXC4P09017 264 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CCR5P51681 352 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 DNAJB13P59910 316 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 BST1Q10588 318 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 LIPMQ5VYY2 423 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 TMEM220Q6QAJ8 160 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 MAMSTRQ6ZN01 415 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 NEK10Q6ZWH5 1172 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 ZNF547Q8IVP9 402 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 PGBD3Q8N328 593 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 FUBP1Q96AE4 644 aaKnown RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 LGR4Q9BXB1 951 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 WDR26Q9H7D7 661 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 SLCO1B3Q9NPD5 702 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 FGFR1OP2Q9NVK5 253 aa19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 WSB2Q9NYS7 404 aaPredicted RBP19.16■□□□□ 0.66
PDLIM2-205ENST00000397761 CACNA1IQ9P0X4 2223 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 A8MT66 165 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 KLK8O60259 260 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 ZNF217O75362 1048 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 APBB3O95704 486 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 MYCLP1P12525 358 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 ZNF8P17098 575 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 MAT2AP31153 395 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 OCRLQ01968 901 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 TSNQ15631 228 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 TMEM31Q5JXX7 168 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 SBSNQ6UWP8 590 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 PIWIL4Q7Z3Z4 852 aaKnown RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 ADAMTSL2Q86TH1 951 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 RASGRP3Q8IV61 690 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 CAMKK1Q8N5S9 505 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 BEND7Q8N7W2 519 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 ASZ1Q8WWH4 475 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 PHPT1Q9NRX4 125 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 GULP1Q9UBP9 304 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 SIT1Q9Y3P8 196 aa19.15■□□□□ 0.66
PDLIM2-205ENST00000397761 C17orf113A0A1B0GUU1 675 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 SLC5A10A0PJK1 596 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 NPEPPSL1A6NEC2 478 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 BTN3A1O00481 513 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 IPO13O94829 963 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 MPC1LP0DKB6 136 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 NEFHP12036 1026 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 MTAPQ13126 283 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 STX3Q13277 289 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 GTF2H3Q13889 308 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 NAPRTQ6XQN6 538 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 C11orf96Q7Z7L8 435 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 SLC22A9Q8IVM8 553 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 MYO1HQ8N1T3 1032 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 SREK1Q8WXA9 508 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 ELMO1Q92556 727 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 TOE1Q96GM8 510 aaKnown RBP19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 C7orf26Q96N11 449 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 CYP8B1Q9UNU6 501 aa19.14■□□□□ 0.65
PDLIM2-205ENST00000397761 NEMP2A6NFY4 417 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 TMEM202A6NGA9 273 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 SYCE1LA8MT33 242 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 TMEM114B3SHH9 223 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 SLC31A1O15431 190 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 IGHV4-34P06331 123 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 TPBGLP0DKB5 382 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 CD6P30203 668 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 MAGEA9P43362 315 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 ASPHQ12797 758 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 PPP1R3AQ16821 1122 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 XKR5Q6UX68 686 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 ZCCHC23Q6ZST2 131 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 OXR1Q8N573 874 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 BCAS4Q8TDM0 211 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 FOXJ1Q92949 421 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 GLMNQ92990 594 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 GATA5Q9BWX5 397 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 PITPNM3Q9BZ71 974 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 THAP1Q9NVV9 213 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 DLGAP2Q9P1A6 1054 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 TMCO1Q9UM00 188 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 OR1A2Q9Y585 309 aa19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 DNMT3AQ9Y6K1 912 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-205ENST00000397761 IGHV1OR15-9A0A0B4J2B8 117 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 HNRNPA2B1P22626 353 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 NUDT1P36639 197 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 SIGLEC14Q08ET2 396 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 HSPA14Q0VDF9 509 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 BOP1Q14137 746 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 KIAA0895LQ68EN5 471 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 CGB2Q6NT52 195 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 FAM47EQ6ZV65 393 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 PIGWQ7Z7B1 504 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 CPLX4Q7Z7G2 160 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 VRK3Q8IV63 474 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 L3HYPDHQ96EM0 354 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 APOOQ9BUR5 198 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 C20orf27Q9GZN8 174 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 NSRP1Q9H0G5 558 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 C6orf106Q9H6K1 298 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 RNF112Q9ULX5 631 aa19.12■□□□□ 0.65
PDLIM2-205ENST00000397761 SLC17A4Q9Y2C5 497 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms