RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RAB6CQ53S08 254 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 XKR7Q5GH72 579 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CERCAMQ5T4B2 595 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PAOXQ6QHF9 649 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FGD2Q7Z6J4 655 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 OR8H3Q8N146 312 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TRIB3Q96RU7 358 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PARK7Q99497 189 aaKnown RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FEM1AQ9BSK4 669 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RAB6CQ9H0N0 254 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GSTO2Q9H4Y5 243 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ABCB9Q9NP78 766 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RASSF1Q9NS23 344 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TAS2R13Q9NYV9 303 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NAALAD2Q9Y3Q0 740 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CEPT1Q9Y6K0 416 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TLL2Q9Y6L7 1015 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ILVBLA1L0T0 632 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 H7C0S8 307 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 KERAO60938 352 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SCELO95171 688 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 THP07101 528 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SERPINF2P08697 491 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PRIM2P49643 509 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ERVK-8P63133 956 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TEKQ02763 1124 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MERTKQ12866 999 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ACOX1Q15067 660 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ATP6AP1Q15904 470 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ISCA2Q86U28 154 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RETREG3Q86VR2 466 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 OSTM1Q86WC4 334 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 RNFT2Q96EX2 444 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FBXL20Q96IG2 436 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 YIPF2Q9BWQ6 316 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 GPN2Q9H9Y4 310 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 AIG1Q9NVV5 245 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TOR4AQ9NXH8 423 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 IKZF3Q9UKT9 509 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PCDHB3Q9Y5E6 796 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 G3V2T6 193 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 I6L893 689 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CPNE6O95741 557 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NDST3O95803 873 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 IL6P05231 212 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MMP3P08254 477 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 THRBP10828 461 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 FUT4P22083 530 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MAGEA10P43363 369 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 STC1P52823 247 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SLC16A1P53985 500 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CSNK2BP67870 215 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 MAD2L1Q13257 205 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 UGT3A2Q3SY77 523 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 C10orf62Q5T681 223 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ADAMTSL2Q86TH1 951 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TAC4Q86UU9 113 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CACTIN-AS1Q8N1I8 211 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 DERL2Q9GZP9 239 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 PSME2Q9UL46 239 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 ERVW-1Q9UQF0 538 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 U3KQV3 271 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NRP1O14786 923 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 DPM1O60762 260 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ESR1P03372 595 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 LINC00032P0C843 101 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 DPY19L1Q2PZI1 675 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 VPS26BQ4G0F5 336 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 NAPRTQ6XQN6 538 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 CILP2Q8IUL8 1156 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PHYKPLQ8IUZ5 450 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 FUNDC1Q8IVP5 155 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PTGR2Q8N8N7 351 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 OR8J3Q8NGG0 315 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 BRSK1Q8TDC3 778 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 REXO5Q96IC2 774 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PSKH2Q96QS6 385 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF382Q96SR6 550 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 IL37Q9NZH6 218 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TRMT6Q9UJA5 497 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PIN4Q9Y237 131 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SLC9A8Q9Y2E8 581 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 DNAJC15Q9Y5T4 150 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SCN4AP35499 1836 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZSCAN5BA6NJL1 495 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 PRKD3O94806 890 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 EPN2O95208 641 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HIST1H2AGP0C0S8 130 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF182P17025 639 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HIST1H2ADP20671 130 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 MAPK8P45983 427 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 DDX39BQ13838 428 aaKnown RBP5.38□□□□□ -1.55
PTPRD-205ENST00000397611 GK3PQ14409 553 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM236Q5W0B7 351 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 SCIMPQ6UWF3 145 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 GPR180Q86V85 440 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HIST1H2AHQ96KK5 128 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 AGAP2Q99490 1192 aa5.38□□□□□ -1.55
PTPRD-205ENST00000397611 HIST1H2AJQ99878 128 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms