RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 PIM3Q86V86 326 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 OR10G6Q8NH81 332 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 WWP1Q9H0M0 922 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 MARCH4Q9P2E8 410 aaPredicted RBP24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 ZNF624Q9P2J8 865 aaPredicted RBP24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 WDR37Q9Y2I8 494 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 PRSS21Q9Y6M0 314 aa24.87■■□□□ 1.57
TSPAN4-207ENST00000397411 PRR19A6NJB7 356 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 OR52A4PA6NMU1 304 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 NTN3O00634 580 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 CASC3O15234 703 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 BRAFP15056 766 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 MAGEA3P43357 314 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 MAPK9P45984 424 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 DHX9Q08211 1270 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 CALCOCO2Q13137 446 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 TUBB2AQ13885 445 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 KRT33BQ14525 404 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 CLCA4Q14CN2 919 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 ISXQ2M1V0 245 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 HIBCHQ6NVY1 386 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 KIF18AQ8NI77 898 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 ELMO1Q92556 727 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 FCRL3Q96P31 734 aaPredicted RBP24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 ERP44Q9BS26 406 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 TUBB2BQ9BVA1 445 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 DPH5Q9H2P9 285 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 POT1Q9NUX5 634 aa24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 UTP11Q9Y3A2 253 aaKnown RBP24.86■■□□□ 1.57
TSPAN4-207ENST00000397411 UBA6A0AVT1 1052 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 TRABD2BA6NFA1 517 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 TMX2-CTNND1H3BSU7 103 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 RAD51CO43502 376 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 USP1O94782 785 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 SEC31AO94979 1220 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 CPNE6O95741 557 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 ARL4CP56559 192 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 UBE2IP63279 158 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 NR1D2Q14995 579 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 RPE65Q16518 533 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 SYTL3Q4VX76 610 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 NKAIN2Q5VXU1 208 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 PTRHD1Q6GMV3 140 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 NEPROQ6NW34 567 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 GRAMD1AQ96CP6 724 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 C12orf66Q96MD2 445 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 TMEM74Q96NL1 305 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 TRIM56Q9BRZ2 755 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 C20orf96Q9NUD7 363 aaPredicted RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 IMP3Q9NV31 184 aaKnown RBP24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 AK5Q9Y6K8 562 aa24.85■■□□□ 1.57
TSPAN4-207ENST00000397411 D6RAR5 112 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 PRMT5O14744 637 aaPredicted RBP24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 PGAM1P18669 254 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 CD1CP29017 333 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 RPL21P46778 160 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 INHBCP55103 352 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 GPLD1P80108 840 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 BRD3Q15059 726 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 LONRF1Q17RB8 773 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 TMEM135Q86UB9 458 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 RBM12BQ8IXT5 1001 aaKnown RBP24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 TCF12Q99081 682 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 NAT9Q9BTE0 207 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 STRADBQ9C0K7 418 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 RAB17Q9H0T7 212 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 COG4Q9H9E3 785 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 RDH14Q9HBH5 336 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 EPB41L5Q9HCM4 733 aa24.84■■□□□ 1.57
TSPAN4-207ENST00000397411 IGHV1OR21-1A0A087WYE8 117 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 IFRD1O00458 451 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 DUX1O43812 170 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 AMD1P17707 334 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 ITGB6P18564 788 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 ARNTP27540 789 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 ARCN1P48444 511 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 HIF1AQ16665 826 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 CLPPQ16740 277 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 HP1BP3Q5SSJ5 553 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 RNF187Q5TA31 235 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 TMEM26Q6ZUK4 368 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 ZNF572Q7Z3I7 529 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 LRRC6Q86X45 466 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 LILRA3Q8N6C8 439 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 MNS1Q8NEH6 495 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 GPR150Q8NGU9 434 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 GABPB2Q8TAK5 448 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 NCSTNQ92542 709 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 INSM2Q96T92 566 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 EBNA1BP2Q99848 306 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 FOXP3Q9BZS1 431 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 GNPTGQ9UJJ9 305 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 PCDHB1Q9Y5F3 818 aa24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 CFAP20Q9Y6A4 193 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-207ENST00000397411 LIN7AO14910 233 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 BANF1O75531 89 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 TTC4O95801 387 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 MTHFD1P11586 935 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms