RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GIMAP7Q8NHV1 300 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 GLMNQ92990 594 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 TMEM159Q96B96 161 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 FAM136AQ96C01 138 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 PDLIM5Q96HC4 596 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 UBXN10Q96LJ8 280 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 SELENOSQ9BQE4 189 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 DERL2Q9GZP9 239 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 TM9SF3Q9HD45 589 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 MID2Q9UJV3 735 aa23.17■■□□□ 1.3
TSPAN4-202ENST00000397396 MGAT4DA6NG13 374 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 POP7O75817 140 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 CCDC166P0CW27 439 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 GNSP15586 552 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 OAS2P29728 719 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 RPA4Q13156 261 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 LRP8Q14114 963 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 BOP1Q14137 746 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 TEAD4Q15561 434 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 CCDC153Q494R4 210 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 NEK10Q6ZWH5 1172 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 ZNF547Q8IVP9 402 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 MYO1HQ8N1T3 1032 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 ZBTB44Q8NCP5 570 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 FAM76AQ8TAV0 307 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 OR2M4Q96R27 311 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 FGF22Q9HCT0 170 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 FAM53CQ9NYF3 392 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 ZNHIT2Q9UHR6 403 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 MOSPD1Q9UJG1 213 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 SUFUQ9UMX1 484 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 MUC3AQ02505 3323 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 DOCK9Q9BZ29 2069 aa23.16■■□□□ 1.3
TSPAN4-202ENST00000397396 SPTY2D1-AS1A0A0U1RR47 76 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 A0A1W2PR77 199 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 TMEM120BA0PK00 339 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 GALR2O43603 387 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 SPAG7O75391 227 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 DHPSP49366 369 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 BLKP51451 505 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 AFF3P51826 1226 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 CSHL1Q14406 222 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 ACAP2Q15057 778 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 PLK5Q496M5 336 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 PYCR3Q53H96 274 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 KDM7AQ6ZMT4 941 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 RABEPKQ7Z6M1 372 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 PARGQ86W56 976 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 CPNE9Q8IYJ1 553 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 CENPLQ8N0S6 344 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 BEND7Q8N7W2 519 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 KCTD4Q8WVF5 259 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 LINGO1Q96FE5 620 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 ZC3H10Q96K80 434 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 CARS2Q9HA77 564 aaKnown RBP23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 DGKBQ9Y6T7 804 aa23.15■■□□□ 1.3
TSPAN4-202ENST00000397396 BCAT2O15382 392 aaPredicted RBP23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 GPC4O75487 556 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 RASGRP1O95267 797 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 RBP1P09455 135 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 MPC1LP0DKB6 136 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 PBLDP30039 288 aaPredicted RBP23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 HOXD12P35452 270 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 SRP54P61011 504 aaKnown RBP23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 ARHGAP8P85298 464 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 IRF9Q00978 393 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 DMPKQ09013 629 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 HSPA14Q0VDF9 509 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 GBX1Q14549 363 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 TMEM207Q6UWW9 146 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 C11orf96Q7Z7L8 435 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 NAT14Q8WUY8 206 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 SLC30A3Q99726 388 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 C1QTNF1Q9BXJ1 281 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 CYP4F12Q9HCS2 524 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 GALPQ9UBC7 116 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 RUVBL2Q9Y230 463 aaKnown RBP23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 PIKFYVEQ9Y2I7 2098 aa23.14■■□□□ 1.3
TSPAN4-202ENST00000397396 SLC5A10A0PJK1 596 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 FAM86C2PA6NEL3 165 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 VILLO15195 856 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 HRO43593 1189 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 SLCO2B1O94956 709 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 TNFP01375 233 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 CREB1P16220 341 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 GNPDA1P46926 289 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 PPARDQ03181 441 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 ARMCX6Q7L4S7 300 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 SLC22A18ASQ8N1D0 253 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 C1orf216Q8TAB5 229 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 TCP10LQ8TDR4 215 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 OR1E3Q8WZA6 343 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 NXNL1Q96CM4 212 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 PDXPQ96GD0 296 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 COL25A1Q9BXS0 654 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 DPEP2Q9H4A9 486 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 TFB2MQ9H5Q4 396 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 COG4Q9H9E3 785 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 IGSF5Q9NSI5 407 aa23.13■■□□□ 1.29
TSPAN4-202ENST00000397396 TRNAU1APQ9NX07 287 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms