RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 HOOK1Q9UJC3 728 aaKnown RBP13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 DNAJC16Q9Y2G8 782 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 RTTNQ86VV8 2226 aa13.31□□□□□ -0.28
VCPKMT-201ENST00000395859 UBA6A0AVT1 1052 aaPredicted RBP13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 RGSL1A5PLK6 1076 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 SIGLEC16A6NMB1 481 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 EEF2KO00418 725 aaKnown RBP13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 PEX12O00623 359 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 KMOO15229 486 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 MAFKO60675 156 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 MTA2O94776 668 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 UNGP13051 313 aaPredicted RBP13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 KPNA2P52292 529 aaKnown RBP13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 FMO1Q01740 532 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 INSCQ1MX18 579 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 TMTC4Q5T4D3 741 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 KLHL35Q6PF15 583 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 FBXO38Q6PIJ6 1188 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 CRTC3Q6UUV7 619 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 RFX8Q6ZV50 586 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 CEP97Q8IW35 865 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 C3orf20Q8ND61 904 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 OR2Y1Q8NGV0 311 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 ADAMTS18Q8TE60 1221 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 SLC20A1Q8WUM9 679 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 EID2BQ96D98 161 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 TMEM121Q9BTD3 319 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 TLR10Q9BXR5 811 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 TNFRSF10DQ9UBN6 386 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 FHOD1Q9Y613 1164 aa13.3□□□□□ -0.28
VCPKMT-201ENST00000395859 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 C9J4A7 227 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 H3BMH7 237 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 AGPSO00116 658 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 LDB2O43679 373 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 KLK2P20151 261 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 IDSP22304 550 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 FOXL2P58012 376 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 ADCY2Q08462 1091 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 DPYSQ14117 519 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 TDRD12Q587J7 1177 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 ALG1LQ6GMV1 187 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 MRPL14Q6P1L8 145 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 CYP4V2Q6ZWL3 525 aaPredicted RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 LRRTM4Q86VH4 590 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 ZNF677Q86XU0 584 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 CHTF18Q8WVB6 975 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 KCTD15Q96SI1 283 aaPredicted RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 FOXC2Q99958 501 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 SYTL2Q9HCH5 934 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 SLC6A20Q9NP91 592 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 SEMA3GQ9NS98 782 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 HRASLS2Q9NWW9 162 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 DNPEPQ9ULA0 475 aa13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 PTRH2Q9Y3E5 179 aaKnown RBP13.29□□□□□ -0.28
VCPKMT-201ENST00000395859 DDX3YO15523 660 aaKnown RBP13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 CLDN14O95500 239 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 CBSLP0DN79 551 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 CBSP35520 551 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 RPL7AP62424 266 aaKnown RBP13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 OGDHQ02218 1023 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 PRKD1Q15139 912 aaPredicted RBP13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 RPE65Q16518 533 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 AGAP7PQ5VUJ5 663 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 PRAMEF13Q5VWM6 474 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 GFRALQ6UXV0 394 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 CATSPER1Q8NEC5 780 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 NACC2Q96BF6 587 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 CNDP1Q96KN2 507 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 TIGD1Q96MW7 591 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 AGAP4Q96P64 663 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 CNPY3Q9BT09 278 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 AP4E1Q9UPM8 1137 aa13.28□□□□□ -0.28
VCPKMT-201ENST00000395859 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 F8VZ95 297 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 ZNF749O43361 778 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 SLC25A14O95258 325 aaPredicted RBP13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 IGFBP2P18065 325 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 MST1P26927 711 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 DNAJA1P31689 397 aaKnown RBP13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 FOLR3P41439 243 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 HCAR3P49019 387 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 CSNK1G2P78368 415 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 CDR2Q01850 454 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 DMPKQ09013 629 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 INAQ16352 499 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 KLHDC7AQ5VTJ3 777 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 TMEM207Q6UWW9 146 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 B4GALNT4Q76KP1 1039 aa13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 PHF13Q86YI8 300 aaPredicted RBP13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 ELOA2Q8IYF1 753 aaPredicted RBP13.27□□□□□ -0.29
VCPKMT-201ENST00000395859 PTERQ96BW5 349 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms