RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FAM86B1E9PN63 330 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 PSMA7O14818 248 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MED24O75448 989 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 FAM86B2P0C5J1 330 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 ATP6V1B1P15313 513 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 PDGFRAP16234 1089 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 C21orf33P30042 268 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 CORO1AP31146 461 aaKnown RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 YWHAHQ04917 246 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 GAGE2BQ13066 116 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 DHX34Q14147 1143 aaKnown RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 NR1D2Q14995 579 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 SRSF7Q16629 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MEP1BQ16820 701 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 GAGE2EQ4V326 116 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 FAM109BQ6ICB4 259 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 GAGE2AQ6NT46 116 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 DSG4Q86SJ6 1040 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 GPR180Q86V85 440 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MFN1Q8IWA4 741 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 PRR26Q8N8Z3 221 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 NRACQ8N912 160 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 EXD1Q8NHP7 514 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 DENND1AQ8TEH3 1009 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 GRK7Q8WTQ7 553 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLC38A5Q8WUX1 472 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MTERF1Q99551 399 aaKnown RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 FERMT1Q9BQL6 677 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 TMEM79Q9BSE2 394 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MMTAG2Q9BU76 263 aaKnown RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MLPHQ9BV36 600 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 KATNB1Q9BVA0 655 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 DNAI2Q9GZS0 605 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 WNT5BQ9H1J7 359 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 SEMA6AQ9H2E6 1030 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MYNNQ9NPC7 610 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 MTRRQ9UBK8 725 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 GAGE2DQ9UEU5 116 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 RNF150Q9ULK6 438 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 FZD10Q9ULW2 581 aa4.87□□□□□ -1.63
HMGB1P10-201ENST00000395823 A0A1W2PPQ1 181 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 TRIM64A6NGJ6 449 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 TRIM64BA6NI03 449 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 CAMTA2O94983 1202 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 TCF4P15884 667 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 CASTP20810 708 aaKnown RBP4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 MPZP25189 248 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 TNFRSF8P28908 595 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 MTHFRP42898 656 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 MMP13P45452 471 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 CTSCP53634 463 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 COG7P83436 770 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 Q0VFX4 171 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 TRAF3Q13114 568 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 OASLQ15646 514 aaKnown RBP4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 IYDQ6PHW0 289 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 COLCA1Q6ZS62 124 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 SRRM1Q8IYB3 904 aaKnown RBP4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 MSANTD4Q8NCY6 345 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 PAPD5Q8NDF8 572 aaKnown RBP4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 OR52I2Q8NH67 350 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 MOSPD2Q8NHP6 518 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 THAP6Q8TBB0 222 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 WASF1Q92558 559 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 ERO1AQ96HE7 468 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 FAM81BQ96LP2 452 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 RMDN2Q96LZ7 410 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLC25A33Q9BSK2 321 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 FUT8Q9BYC5 575 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 MRPL9Q9BYD2 267 aaKnown RBP4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 FOXP1Q9H334 677 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 RETREG1Q9H6L5 497 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 PCDH9Q9HC56 1237 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 HHATLQ9HCP6 504 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZNF804BA4D1E1 1349 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 IGSF1Q8N6C5 1336 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
HMGB1P10-201ENST00000395823 SMTNL1A8MU46 457 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 TMEM178BH3BS89 294 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 AKAP8O43823 692 aaKnown RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 RFPL2O75678 378 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 GCNT3O95395 438 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 SYF2O95926 243 aaKnown RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 RAB40ALP0C0E4 278 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 OR2T7P0C7T2 308 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 IGHV4-30-4P0DP06 118 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 PSG1P11464 419 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 CD22P20273 847 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 S1PR1P21453 382 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 CDC25CP30307 473 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZNF75DP51815 510 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 NAGLUP54802 743 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 ROR2Q01974 943 aaKnown RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 RRS1Q15050 365 aaKnown RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 FAM91A1Q658Y4 838 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 DBX2Q6ZNG2 339 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 DET1Q7L5Y6 550 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms