RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 LCKP06239 509 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CNPP09543 421 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 NUDT7P0C024 238 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TRAPPC2P0DI81 140 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TRAPPC2BP0DI82 140 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ACADLP28330 430 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 EPHX2P34913 555 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MAGEA11P43364 429 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 GABARAPL2P60520 117 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MRPS5P82675 430 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CTBSQ01459 385 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 POU4F1Q01851 419 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ELP6Q0PNE2 266 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 UAP1L1Q3KQV9 507 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 PLA2G4FQ68DD2 849 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 IKBIPQ70UQ0 350 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CMTR2Q8IYT2 770 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CENPLQ8N0S6 344 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 NAT8LQ8N9F0 302 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 IL17RDQ8NFM7 739 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 OR4D10Q8NGI6 311 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SLC2A14Q8TDB8 520 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 FCGR1BQ92637 280 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 S100PBPQ96BU1 408 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 C20orf27Q9GZN8 174 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TOPORSQ9NS56 1045 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 DUS2Q9NX74 493 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 KCND2Q9NZV8 630 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CLCA2Q9UQC9 943 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MYL12BO14950 172 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 LDOC1O95751 146 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MYL12AP19105 171 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CD72P21854 359 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CRHBPP24387 322 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 PPP3CCP48454 512 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 GBX2P52951 348 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 MLLT10P55197 1068 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 GRM7Q14831 915 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZNF169Q14929 603 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ATP6AP1Q15904 470 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ADPRMQ3LIE5 342 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 FLYWCH1Q4VC44 716 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZC3H12BQ5HYM0 836 aaKnown RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 CATSPEREQ5SY80 951 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ZBTB8OSQ8IWT0 167 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 TMBIM1Q969X1 311 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 C19orf60Q96EN9 201 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 AURKBQ96GD4 344 aaPredicted RBP7.54□□□□□ -1.2
VTI1A-201ENST00000393077 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 SEC14L4Q9UDX3 406 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 ACOT9Q9Y305 439 aa7.54□□□□□ -1.2
VTI1A-201ENST00000393077 LRP6O75581 1613 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TCRBV7S3A2A0A539 114 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 KRBOX1C9JBD0 128 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLC1A7O00341 560 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TBX3O15119 743 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ARPC2O15144 300 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 B4GALT4O60513 344 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 CALCAP01258 141 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ZBTB48P10074 688 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 RORAP35398 523 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SREBF1P36956 1147 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SOX9P48436 509 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 GZMKP49863 264 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 JAK3P52333 1124 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLC9A5Q14940 896 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TRMT10BQ6PF06 316 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TMPRSS9Q7Z410 1059 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 CCDC36Q8IYA8 594 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLC34A3Q8N130 599 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 OR5T2Q8NGG2 359 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 OR6P1Q8NGX9 317 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 TAS1R2Q8TE23 839 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PMM1Q92871 262 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLC38A4Q969I6 547 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 MARC2Q969Z3 335 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 RBBP8Q99708 897 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 MXRA8Q9BRK3 442 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ABCG4Q9H172 646 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 OLA1Q9NTK5 396 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 FBXO5Q9UKT4 447 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PPIEQ9UNP9 301 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PCDHA10Q9Y5I2 948 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 APOC4-APOC2K7ER74 178 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 KPNA3O00505 521 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLITRK3O94933 977 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 GABARAPO95166 117 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 APOC2P02655 101 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ICAM1P05362 532 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 APLP1P51693 650 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 AIF1P55008 147 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 BACE1P56817 501 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 YWHAZP63104 245 aaKnown RBP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 SLAMF1Q13291 335 aa7.53□□□□□ -1.2
VTI1A-201ENST00000393077 PCBP1Q15365 356 aaKnown RBP eCLIP7.53□□□□□ -1.2
VTI1A-201ENST00000393077 ATP6AP1LQ52LC2 224 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms