RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FUKQ8N0W3 1084 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 HJURPQ8NCD3 748 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 LIN37Q96GY3 246 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 TLL2Q9Y6L7 1015 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 FAM205AQ6ZU69 1335 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 FABP12A6NFH5 140 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 OXSR1O95747 527 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 TRBC1P01850 177 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 PRKCDQ05655 676 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 PRKD1Q15139 912 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 CYP2U1Q7Z449 544 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 GLB1L3Q8NCI6 653 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 KIAA0895Q8NCT3 520 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 SLC16A10Q8TF71 515 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 IL25Q9H293 177 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 RANBP3Q9H6Z4 567 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 C1orf109Q9NX04 203 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 A0A087X0B3 334 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 CSTBP04080 98 aaKnown RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 COL6A2P12110 1019 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 SLC30A6Q6NXT4 461 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 ECHDC2Q86YB7 292 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 DEFB106AQ8N104 65 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 PQLC1Q8N2U9 271 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 SEMA4AQ9H3S1 761 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 KNL1Q8NG31 2342 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 USP32Q8NFA0 1604 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 PSKH1P11801 424 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 ARFRP1Q13795 201 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 ZIK1Q3SY52 487 aaPredicted RBP14.58□□□□□ -0.08
CCDC50-201ENST00000392455 OR2T12Q8NG77 320 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 ALG9Q9H6U8 611 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 TBC1D14Q9P2M4 693 aa14.58□□□□□ -0.08
CCDC50-201ENST00000392455 TTC3P53804 2025 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 A0A1B0GVM2 712 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 TCAF2A6NFQ2 919 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 AIPO00170 330 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 FAM86B2P0C5J1 330 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 HEPACAMQ14CZ8 416 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 LRIF1Q5T3J3 769 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 SOCS4Q8WXH5 440 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 CLIC5Q9NZA1 410 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 AFDNP55196 1824 aaKnown RBP14.57□□□□□ -0.08
CCDC50-201ENST00000392455 SSR2P43308 183 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 E2F1Q01094 437 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ZCCHC23Q6ZST2 131 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 SLC41A1Q8IVJ1 513 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ARL10Q8N8L6 244 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 OR8D1Q8WZ84 308 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 SEMA4BQ9NPR2 832 aaPredicted RBP14.57□□□□□ -0.08
CCDC50-201ENST00000392455 RPL36Q9Y3U8 105 aaKnown RBP14.57□□□□□ -0.08
CCDC50-201ENST00000392455 AKR1A1P14550 325 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 PRDX6P30041 224 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 KIR3DL1P43629 444 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 FTMTQ8N4E7 242 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ROPN1LQ96C74 230 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 MARCH2Q9P0N8 246 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ACVR2AP27037 513 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 GRK1Q15835 563 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ALG1LQ6GMV1 187 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 CLPTM1LQ96KA5 538 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 FTHL17Q9BXU8 183 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ARHGAP20Q9P2F6 1191 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 MAB21L2Q9Y586 359 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 SH3PXD2BA1X283 911 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 CTPS1P17812 591 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 IGFBP4P22692 258 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 HSD11B1P28845 292 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ABRAXAS2Q15018 415 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 FAM83AQ86UY5 434 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 POU5F2Q8N7G0 328 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 CYTH4Q9UIA0 394 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 FADS3Q9Y5Q0 445 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ANKRD33BA6NCL7 494 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 CABYRO75952 493 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 HERV-K104P61576 105 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 KCNK18Q7Z418 384 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 KCTD7Q96MP8 289 aa14.57□□□□□ -0.08
CCDC50-201ENST00000392455 ISPDA4D126 451 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 MANSC4A6NHS7 340 aaPredicted RBP14.56□□□□□ -0.08
CCDC50-201ENST00000392455 AZIN1O14977 448 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 SLC34A2O95436 690 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 SP140Q13342 867 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 ACVR2BQ13705 512 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 C9orf64Q5T6V5 341 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 LLGL2Q6P1M3 1020 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 KCNT2Q6UVM3 1135 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 RNF148Q8N7C7 305 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 ZYG11BQ9C0D3 744 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 GPSM3Q9Y4H4 160 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 IL1R1P14778 569 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 GLP1RP43220 463 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 TAS2R50P59544 299 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 RPL38P63173 70 aaKnown RBP14.56□□□□□ -0.08
CCDC50-201ENST00000392455 LRRC38Q5VT99 294 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 MTFR2Q6P444 385 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 BAIAP2L2Q6UXY1 529 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
CCDC50-201ENST00000392455 NODALQ96S42 347 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms