RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PNMA2Q9UL42 364 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 MKLN1Q9UL63 735 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 GPR52Q9Y2T5 361 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM184BQ9Y519 407 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 CLIC4Q9Y696 253 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 DGKBQ9Y6T7 804 aa1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 TP53BP1Q12888 1972 aaPredicted RBP1.19□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A1W2PPH5 198 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A1W2PQM1 296 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A1W2PRB8 838 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PLEKHD1A6NEE1 506 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 LDLRAD4O15165 306 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 OGG1O15527 345 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 TNFSF14O43557 240 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 HS6ST1O60243 411 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SYNCRIPO60506 623 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PAGE4O60829 102 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PEX14O75381 377 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PRKRAO75569 313 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CDC123O75794 336 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 AP2A2O94973 939 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 RAF1P04049 648 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ICAM1P05362 532 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 UBL4AP11441 157 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ACADSP16219 412 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CDH2P19022 906 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PIK3R1P27986 724 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 MAGEA11P43364 429 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 MMP15P51511 669 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 GALCP54803 685 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 DSCR10P59022 87 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 KRTAP10-3P60369 221 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 HERV-K104P61576 105 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SNRPEP62304 92 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SPOCK1Q08629 439 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM115Q12893 351 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 GPR17Q13304 367 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 KRT33BQ14525 404 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 DLG2Q15700 870 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 HLA-BQ31612 363 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CDONQ4KMG0 1287 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 FASTKD1Q53R41 847 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ADAMTSL4-AS1Q5T5F5 129 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 HIST2H2BDQ6DRA6 164 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ACAD10Q6JQN1 1059 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 LCN10Q6JVE6 187 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF613Q6PF04 617 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 DOK6Q6PKX4 331 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SARM1Q6SZW1 724 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 Q75L30 129 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CPLX4Q7Z7G2 160 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 TBC1D1Q86TI0 1168 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ERC1Q8IUD2 1116 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ARID3BQ8IVW6 561 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ESX1Q8N693 406 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PDILTQ8N807 584 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 FRMD1Q8N878 549 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 L3MBTL4Q8NA19 623 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ARHGEF2Q92974 986 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CENPTQ96BT3 561 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ERLEC1Q96DZ1 483 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC47A1Q96FL8 570 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC39A13Q96H72 371 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CCDC34Q96HJ3 373 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PPP1R13BQ96KQ4 1090 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF300Q96RE9 604 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 USP28Q96RU2 1077 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 MYADMQ96S97 322 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PSMB7Q99436 277 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 SLX1AQ9BQ83 275 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 LBHD1Q9BQE6 289 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PIGQQ9BRB3 760 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 GPATCH1Q9BRR8 931 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 TRAF4Q9BUZ4 470 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CLEC7AQ9BXN2 247 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 DGCR6LQ9BY27 220 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 GLIS2Q9BZE0 524 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PAIP1Q9H074 479 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM49AQ9H0Q0 323 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 PPANQ9NQ55 473 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CCDC177Q9NQR7 707 aaPredicted RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 DIAPH3Q9NSV4 1193 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 IRAK4Q9NWZ3 460 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 ABI3Q9P2A4 366 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CNOT8Q9UFF9 292 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 MAN1B1Q9UKM7 699 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 TP53TG3Q9ULZ0 132 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 LAS1LQ9Y4W2 734 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 LRRFIP2Q9Y608 721 aaKnown RBP1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 CAPN7Q9Y6W3 813 aa1.18□□□□□ -2.22
SNORD28B-201ENST00000390993 IGHV4-61A0A0C4DH41 118 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 FAM237BA0A1B0GVD1 139 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A1W2PN81 502 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 ELOVL7A1L3X0 281 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 TMEM189-UBE2V1I3L0A0 370 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 J3QR06 171 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 NPHP1O15259 732 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 ATP6V0E1O15342 81 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 NDUFS4O43181 175 aa1.17□□□□□ -2.22
SNORD28B-201ENST00000390993 PIP5K1CO60331 668 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms