RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 ALDH8A1Q9H2A2 487 aaPredicted RBP4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 LRMDAQ9H2I8 198 aa4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 NOL11Q9H8H0 719 aaKnown RBP4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 ANKZF1Q9H8Y5 726 aa4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 EQTNQ9NQ60 294 aa4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 SMARCAL1Q9NZC9 954 aa4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 ZNF224Q9NZL3 707 aa4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 AMDHD2Q9Y303 409 aa4.41□□□□□ -1.7
RNU6-549P-201ENST00000384433 A0A0G2JPF8 293 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 ANKUB1A6NFN9 424 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 LILRA5A6NI73 299 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 HNRNPCL3B7ZW38 293 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 OR10H2O60403 315 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 PENKP01210 267 aaPredicted RBP4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 LINGO3P0C6S8 592 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 HNRNPCL4P0DMR1 293 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 IFNAR1P17181 557 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 ACHEP22303 614 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 SCP2P22307 547 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 CDC25AP30304 524 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 NPY4RP50391 375 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 CTSCP53634 463 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 PNRC1Q12796 327 aaPredicted RBP4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 HECTD3Q5T447 861 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 CST9LP1Q5W188 147 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 CCDC186Q7Z3E2 898 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 GLRX5Q86SX6 157 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 LILRB1Q8NHL6 650 aaPredicted RBP4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 GOT1L1Q8NHS2 421 aaPredicted RBP4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 MAGEC3Q8TD91 643 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 SMPDL3BQ92485 455 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 SMG7Q92540 1137 aaKnown RBP4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 PHF21BQ96EK2 531 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 CFAP57Q96MR6 1250 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 MS4A10Q96PG2 267 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 NUP85Q9BW27 656 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 WNT16Q9UBV4 365 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 MALT1Q9UDY8 824 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 ANAPC5Q9UJX4 755 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 RALYQ9UKM9 306 aaKnown RBP4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 RNF150Q9ULK6 438 aa4.4□□□□□ -1.71
RNU6-549P-201ENST00000384433 TEX13DA0A0J9YY54 714 aaPredicted RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TMEM221A6NGB7 291 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 C4orf47A7E2U8 309 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 WDR1O75083 606 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 BMP10O95393 424 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 ZBTB11O95625 1053 aaPredicted RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 ALPLP05186 524 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 IGKV2-30P06310 120 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 KRT19P08727 400 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TKTP29401 623 aaKnown RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TLX1P31314 330 aaPredicted RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 AMPHP49418 695 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 HTR6P50406 440 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 RAB28P51157 221 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TUBA1BP68363 451 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 CDK3Q00526 305 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 LTBQ06643 244 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 ACSM1Q08AH1 577 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TFCP2Q12800 502 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 SCARB2Q14108 478 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TNIP1Q15025 636 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 HLFQ16534 295 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 HYAL4Q2M3T9 481 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 OR7E24Q6IFN5 339 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 CAVIN1Q6NZI2 390 aaKnown RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 DGLUCYQ7Z3D6 616 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 FAM114A1Q8IWE2 563 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 CAMKVQ8NCB2 501 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 OR5M8Q8NGP6 311 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 DNAAF4Q8WXU2 420 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 PHF21AQ96BD5 680 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 HDAC11Q96DB2 347 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 SPDL1Q96EA4 605 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 FAM84BQ96KN1 310 aaPredicted RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 ZNF558Q96NG5 402 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 ADPGKQ9BRR6 497 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 DESI2Q9BSY9 194 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 FNDC11Q9BVV2 318 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 EDEM3Q9BZQ6 932 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 HHATLQ9HCP6 504 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 TCP11L1Q9NUJ3 509 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 DDX25Q9UHL0 483 aaKnown RBP4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 PCDHAC2Q9Y5I4 1007 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 LIPGQ9Y5X9 500 aa4.39□□□□□ -1.71
RNU6-549P-201ENST00000384433 ZCWPW2A0A1B0GU75 182 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 FAM90A10PA6NDY2 464 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 EIF3DO15371 548 aaKnown RBP eCLIP4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 RECQL5O94762 991 aaPredicted RBP4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 DANCRP0C864 163 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 ACP2P11117 423 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 FCGR1AP12314 374 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 POLR2CP19387 275 aaPredicted RBP4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 MPZP25189 248 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 ARCN1P48444 511 aaKnown RBP4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 POLGP54098 1239 aaPredicted RBP4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 TPD52P55327 224 aaPredicted RBP4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 RBPJQ06330 500 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
RNU6-549P-201ENST00000384433 PLA2G7Q13093 441 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms