RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 GALNT15Q8N3T1 639 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 SFRP1Q8N474 314 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 OR2L2Q8NH16 312 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 HNRNPLLQ8WVV9 542 aaKnown RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 CCM2Q9BSQ5 444 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 STN1Q9H668 368 aaKnown RBP19.03■□□□□ 0.64
GTF3A-201ENST00000381140 VPS37BQ9H9H4 285 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 GRHL1Q9NZI5 618 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 WHRNQ9P202 907 aa19.03■□□□□ 0.64
GTF3A-201ENST00000381140 COL27A1Q8IZC6 1860 aaPredicted RBP19.02■□□□□ 0.64
GTF3A-201ENST00000381140 OR52A4PA6NMU1 304 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 NDC80O14777 642 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 NDUFS3O75489 264 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 AP2A2O94973 939 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 ITGB6P18564 788 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 ECHS1P30084 290 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 HALP42357 657 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 TTPAP49638 278 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 ARL4CP56559 192 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 OR1D5P58170 312 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 HHEXQ03014 270 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 DMPKQ09013 629 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 THOC5Q13769 683 aaKnown RBP19.02■□□□□ 0.64
GTF3A-201ENST00000381140 SPIDRQ14159 915 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 TRADDQ15628 312 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 HIF1AQ16665 826 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 AMZ1Q400G9 498 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 MAP9Q49MG5 647 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 ARMC3Q5W041 872 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 MRNIPQ6NTE8 343 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 PACS1Q6VY07 963 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 TMPRSS7Q7RTY8 843 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 SPRED1Q7Z699 444 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 SDCCAG8Q86SQ7 713 aaPredicted RBP19.02■□□□□ 0.64
GTF3A-201ENST00000381140 SLC9B2Q86UD5 537 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 LILRA3Q8N6C8 439 aaPredicted RBP19.02■□□□□ 0.64
GTF3A-201ENST00000381140 BBOF1Q8ND07 529 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 CFAP36Q96G28 342 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 SGSM3Q96HU1 749 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 ZMYND15Q9H091 742 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 WWP1Q9H0M0 922 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 C20orf96Q9NUD7 363 aaPredicted RBP19.02■□□□□ 0.64
GTF3A-201ENST00000381140 WASF3Q9UPY6 502 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 CLCA2Q9UQC9 943 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 CHMP2BQ9UQN3 213 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 WDR37Q9Y2I8 494 aa19.02■□□□□ 0.64
GTF3A-201ENST00000381140 SPEGQ15772 3267 aa19.02■□□□□ 0.63
GTF3A-201ENST00000381140 KIR2DS5A0A0G2JLQ3 304 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 A0A0G2JNG1 304 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 UBA6A0AVT1 1052 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-201ENST00000381140 PRR19A6NJB7 356 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 OR5K4A6NMS3 321 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 KIR2DS3K7RE56 304 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 SMAPO00193 183 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 USP1O94782 785 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 MT-CO3P00414 261 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 VIPP01282 170 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 MYBL2P10244 700 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 BRAFP15056 766 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 PGAM1P18669 254 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 KIR2DS5Q14953 304 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 ABRAXAS1Q6UWZ7 409 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 TMPRSS12Q86WS5 348 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 HM13Q8TCT9 377 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 IFT81Q8WYA0 676 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 CXorf40BQ96DE9 158 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 GFM1Q96RP9 751 aaKnown RBP19.01■□□□□ 0.63
GTF3A-201ENST00000381140 SLC38A3Q99624 504 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 LRRN3Q9H3W5 708 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 CPNE7Q9UBL6 633 aa19.01■□□□□ 0.63
GTF3A-201ENST00000381140 ZCWPW2A0A1B0GU75 182 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 FTH1P02794 183 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 F7P08709 466 aaPredicted RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 SLC35G4P0C7Q5 338 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 OR56A5P0C7T3 313 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 ELK3P41970 407 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 MAPK9P45984 424 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 FASLGP48023 281 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 ARCN1P48444 511 aaKnown RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 FOXK2Q01167 660 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 CLCA4Q14CN2 919 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 LONRF1Q17RB8 773 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 AGAP9Q5VTM2 703 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 METRNLQ641Q3 311 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 NEPROQ6NW34 567 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 ZDHHC24Q6UX98 284 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 NAPRTQ6XQN6 538 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 TMEM135Q86UB9 458 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 ANKMY2Q8IV38 441 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 IGDCC3Q8IVU1 814 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 SERBP1Q8NC51 408 aaKnown RBP eCLIP19■□□□□ 0.63
GTF3A-201ENST00000381140 AENQ8WTP8 325 aaKnown RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 ELMO1Q92556 727 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 ART4Q93070 314 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 LINC00615Q96LM1 132 aaPredicted RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 EBNA1BP2Q99848 306 aaKnown RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 SARS2Q9NP81 518 aaKnown RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 ZDHHC18Q9NUE0 388 aa19■□□□□ 0.63
GTF3A-201ENST00000381140 IMP3Q9NV31 184 aaKnown RBP19■□□□□ 0.63
GTF3A-201ENST00000381140 KCNK4Q9NYG8 393 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms