RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CORO1CQ9ULV4 474 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 TRAF6Q9Y4K3 522 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 PIKFYVEQ9Y2I7 2098 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 CCDC85CA6NKD9 419 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 PRRT4C9JH25 899 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 FFAR3O14843 346 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 GIPC1O14908 333 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 GPR42O15529 346 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 VPS26AO75436 327 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SCGB1D2O95969 90 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 CD1DP15813 335 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 S100A1P23297 94 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF140P52738 457 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 HSPA14Q0VDF9 509 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 AFTPHQ6ULP2 937 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 RAB44Q7Z6P3 723 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SERPINA9Q86WD7 417 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ADGRG2Q8IZP9 1017 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ARHGAP24Q8N264 748 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 CDYL2Q8N8U2 506 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 PPFIBP2Q8ND30 876 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 TOR1AIP2Q8NFQ8 470 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 SCAMP4Q969E2 229 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ABTB1Q969K4 478 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 AARSD1Q9BTE6 412 aaKnown RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ZBP1Q9H171 429 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF624Q9P2J8 865 aaPredicted RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 INSL6Q9Y581 213 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 COPG1Q9Y678 874 aaKnown RBP10.68□□□□□ -0.7
NEDD9-201ENST00000379433 GMEB1Q9Y692 573 aa10.68□□□□□ -0.7
NEDD9-201ENST00000379433 ANKRD36A6QL64 1941 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 PLK4O00444 970 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 MAP3K7O43318 606 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 S100A6P06703 90 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TPBGLP0DKB5 382 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TYRP14679 529 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 CR2P20023 1033 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 AKT1P31749 480 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 CYLC2Q14093 348 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 BOP1Q14137 746 aaKnown RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 ACAP2Q15057 778 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TCEA2Q15560 299 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 FAM180BQ6P0A1 224 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 PAOXQ6QHF9 649 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 ZER1Q7Z7L7 766 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 IFNEQ86WN2 208 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 FATE1Q969F0 183 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 ISL2Q96A47 359 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TUBB6Q9BUF5 446 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 B3GNT4Q9C0J1 378 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 CLPBQ9H078 707 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 ADNPQ9H2P0 1102 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 MRM3Q9HC36 420 aaKnown RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 NLE1Q9NVX2 485 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 NPIPB15A6NHN6 443 aaPredicted RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 A6NJY4 79 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TARM1B6A8C7 271 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 RNGTTO60942 597 aaKnown RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 ECI2O75521 394 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 C7P10643 843 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 PKMP14618 531 aaKnown RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 IDO1P14902 403 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 GGT5P36269 586 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 MTTPP55157 894 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TIAL1Q01085 375 aaKnown RBP eCLIP10.67□□□□□ -0.72e-8■□□□□ 10.6
NEDD9-201ENST00000379433 PFKPQ01813 784 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 CHRNA6Q15825 494 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 NCEH1Q6PIU2 408 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 CMTR2Q8IYT2 770 aaKnown RBP10.67□□□□□ -0.7
NEDD9-201ENST00000379433 LPGAT1Q92604 370 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 C12orf4Q9NQ89 552 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 DNAJC28Q9NX36 388 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 EMC3Q9P0I2 261 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 PRSS21Q9Y6M0 314 aa10.67□□□□□ -0.7
NEDD9-201ENST00000379433 TMEM114B3SHH9 223 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 UBDO15205 165 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 SLC25A14O95258 325 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 CA3P07451 260 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 CDK4P11802 303 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 HLA-EP13747 358 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 HSD3B2P26439 372 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 FPGSQ05932 587 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 MESP2Q0VG99 397 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TCEAL5Q5H9L2 206 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF362Q5T0B9 420 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TLDC1Q6P9B6 456 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 FBXO46Q6PJ61 603 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 CYP2R1Q6VVX0 501 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 BEND7Q8N7W2 519 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PIP4K2CQ8TBX8 421 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 UBXN10Q96LJ8 280 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 KLHL32Q96NJ5 620 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF599Q96NL3 588 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 EMILIN2Q9BXX0 1053 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 MRPL40Q9NQ50 206 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms