RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ANXA4P09525 319 aaPredicted RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 SLC35G6P0C7Q6 338 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 UROSP10746 265 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 LIPEQ05469 1076 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 MEA1Q16626 185 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 TMEM63BQ5T3F8 832 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 VWA5B1Q5TIE3 1220 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 MMAAQ8IVH4 418 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 THAP3Q8WTV1 239 aaPredicted RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 VAT1Q99536 393 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 GDAP2Q9NXN4 497 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 PLEKHA6Q9Y2H5 1048 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 A0A1B0GVT2 93 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 ZNF878C9JN71 531 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 FAUP35544 74 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 GRK6P43250 576 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 PSEN1P49768 467 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 B3GNT6Q6ZMB0 384 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 C1orf216Q8TAB5 229 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 PRDM8Q9NQV8 689 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 CLCA3PQ9Y6N3 262 aa16.15■□□□□ 0.18
RGP1-201ENST00000378078 MAP2P11137 1827 aaKnown RBP16.15■□□□□ 0.18
RGP1-201ENST00000378078 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.18
RGP1-201ENST00000378078 LDB2O43679 373 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 IL7RP16871 459 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 ST3GAL1Q11201 340 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 MAP4K3Q8IVH8 894 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 MREGQ8N565 214 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 OR4C6Q8NH72 309 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 SMG9Q9H0W8 520 aaKnown RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 FAM198AQ9UFP1 575 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 TMEM5Q9Y2B1 443 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 TRPM1Q7Z4N2 1603 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 ALADP13716 330 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 SELPP16109 830 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 PRKCDQ05655 676 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 CARD17Q5XLA6 110 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 OR5AK3PQ8NH89 298 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 ASB12Q8WXK4 309 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 NCSTNQ92542 709 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 DGAT2Q96PD7 388 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 TEFMQ96QE5 360 aaKnown RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 POLR3BQ9NW08 1133 aaPredicted RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 FUT8Q9BYC5 575 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 GPN1Q9HCN4 374 aaPredicted RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 IFT52Q9Y366 437 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 CD163L1Q9NR16 1453 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 MTX2O75431 263 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 CCNB2O95067 398 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 CPN2P22792 545 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 ILF3Q12906 894 aaKnown RBP eCLIP16.14■□□□□ 0.17
RGP1-201ENST00000378078 OGFRL1Q5TC84 451 aaPredicted RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 PAPD7Q5XG87 772 aaKnown RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 TNFAIP8L2Q6P589 184 aaPredicted RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 CUZD1Q86UP6 607 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 CNPY4Q8N129 248 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 SIPA1Q96FS4 1042 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 METTL8Q9H825 291 aaKnown RBP16.14■□□□□ 0.17
RGP1-201ENST00000378078 MEAF6Q9HAF1 191 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 PLCL2Q9UPR0 1127 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 FAM149AA5PLN7 773 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 MSL3P1P0C860 447 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 MED27Q6P2C8 311 aa16.14■□□□□ 0.17
RGP1-201ENST00000378078 UPF1Q92900 1129 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■□□□ 14.3
RGP1-201ENST00000378078 PEX14O75381 377 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 DACT2Q5SW24 774 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 DCST1Q5T197 706 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 ECHDC2Q86YB7 292 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 JOSD2Q8TAC2 188 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 DMRTB1Q96MA1 342 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 CDH19Q9H159 772 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 SLC15A5A6NIM6 579 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 NOL4O94818 638 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 FABP3P05413 133 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 ACP5P13686 325 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 RPIAP49247 311 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 CDH12P55289 794 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 C1QTNF8P60827 252 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 CD47Q08722 323 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 NOGQ13253 232 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 TMEM119Q4V9L6 283 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 ARPINQ7Z6K5 226 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 ZNF184Q99676 751 aaPredicted RBP16.13■□□□□ 0.17
RGP1-201ENST00000378078 CARS2Q9HA77 564 aaKnown RBP16.13■□□□□ 0.17
RGP1-201ENST00000378078 POU2F3Q9UKI9 436 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 PADI3Q9ULW8 664 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 TM7SF2O76062 418 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 LAG3P18627 525 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 HGSNATQ68CP4 663 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 CAND1Q86VP6 1230 aaKnown RBP16.13■□□□□ 0.17
RGP1-201ENST00000378078 FAM46DQ8NEK8 389 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 PRICKLE1Q96MT3 831 aaPredicted RBP16.13■□□□□ 0.17
RGP1-201ENST00000378078 SLC17A7Q9P2U7 560 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 FRMPD4Q14CM0 1322 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 AOC2O75106 756 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 RPP40O75818 363 aaKnown RBP16.13■□□□□ 0.17
RGP1-201ENST00000378078 IGFBP5P24593 272 aa16.13■□□□□ 0.17
RGP1-201ENST00000378078 ZNF135P52742 658 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms