RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ST13P50502 369 aaKnown RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 TOP3AQ13472 1001 aaPredicted RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 SLC14A2Q15849 920 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 CLPPQ16740 277 aaPredicted RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF691Q5VV52 312 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 LAIR1Q6GTX8 287 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 DLEU7Q6UYE1 221 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 GATAD2AQ86YP4 633 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF560Q96MR9 790 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 ASB2Q96Q27 587 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF300Q96RE9 604 aaPredicted RBP15.67■□□□□ 0.1
CKAP4-201ENST00000378026 UGT2B28Q9BY64 529 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 NECTIN3Q9NQS3 549 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 SSC5DA1L4H1 1573 aa15.67■□□□□ 0.1
CKAP4-201ENST00000378026 DYTNA2CJ06 578 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 NOTOA8MTQ0 251 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 A8MV72 311 aaPredicted RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 CDC7O00311 574 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 OR4F21O95013 312 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 EIF2S1P05198 315 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 CD36P16671 472 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 GGT1P19440 569 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 AIF1P55008 147 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 DCAF4L1Q3SXM0 396 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 C6orf136Q5SQH8 315 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 C14orf80Q86SX3 495 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 CELF2-AS1Q8N7Q2 184 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 LILRB4Q8NHJ6 448 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 BLOC1S5Q8TDH9 187 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TXNDC15Q96J42 360 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 CRTAC1Q9NQ79 661 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 VAPAQ9P0L0 249 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF225Q9UK10 706 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PCDHB14Q9Y5E9 798 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ORC6Q9Y5N6 252 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 MIA3Q5JRA6 1907 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 MCM3APO60318 1980 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 H0Y626 953 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TNPO2O14787 897 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 IDH3BO43837 385 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 MGEA5O60502 916 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 GJB3O75712 270 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PGLSO95336 258 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TRIM16O95361 564 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 SLC2A3P11169 496 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 G6PDP11413 515 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF37AP17032 561 aaPredicted RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 CASP3P42574 277 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 NFKB2Q00653 900 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 DSC2Q02487 901 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PAQR3Q6TCH7 311 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 B3GNT8Q7Z7M8 397 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 EID3Q8N140 333 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ZMIZ2Q8NF64 920 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 KCTD13Q8WZ19 329 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 UBE2FQ969M7 185 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ZNF583Q96ND8 569 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TMEM209Q96SK2 561 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ATOH8Q96SQ7 321 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 CPNE5Q9HCH3 593 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.66■□□□□ 0.15e-9■□□□□ 11.2
CKAP4-201ENST00000378026 FNDC3AQ9Y2H6 1198 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 BOLA1Q9Y3E2 137 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 FAM234BA2RU67 622 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 EFCAB9A8MZ26 197 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TAF4O00268 1085 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 DYRK3O43781 588 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 HPRP00739 348 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 KRT8P05787 483 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 DCTP40126 519 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 RACK1P63244 317 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PHC1P78364 1004 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TIAL1Q01085 375 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■□□□ 13.9
CKAP4-201ENST00000378026 SEMA3AQ14563 771 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PHACTR4Q8IZ21 702 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PHF10Q8WUB8 498 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 PCED1BQ96HM7 432 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 BARD1Q99728 777 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 REXO4Q9GZR2 422 aaKnown RBP15.66■□□□□ 0.1
CKAP4-201ENST00000378026 TESMINQ9Y4I5 508 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ARL5AQ9Y689 179 aa15.66■□□□□ 0.1
CKAP4-201ENST00000378026 ECI2O75521 394 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 PTPN2P17706 415 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 SPATS1Q496A3 300 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 SMUG1Q53HV7 270 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 PM20D1Q6GTS8 502 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 NECAB2Q7Z6G3 386 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 DCP2Q8IU60 420 aaKnown RBP15.65■□□□□ 0.1
CKAP4-201ENST00000378026 ISG20Q96AZ6 181 aaKnown RBP15.65■□□□□ 0.1
CKAP4-201ENST00000378026 YIPF6Q96EC8 236 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 DCSTAMPQ9H295 470 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 IKZF5Q9H5V7 419 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 SMPD4Q9NXE4 827 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 CPA4Q9UI42 421 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 ASB1Q9Y576 335 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 SBF1O95248 1867 aa15.65■□□□□ 0.1
CKAP4-201ENST00000378026 A0A1W2PQ67 120 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms