RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MROH6A6NGR9 719 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 A8MU76 341 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 STMND1H3BQB6 276 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 CEP104O60308 925 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 ANKRD34CP0C6C1 535 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 SLC35G4P0C7Q5 338 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 ATP1B2P14415 290 aaPredicted RBP16.48■□□□□ 0.23
HMGN4-201ENST00000377575 TYRP1P17643 537 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 VAC14Q08AM6 782 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 SIX1Q15475 284 aaPredicted RBP16.48■□□□□ 0.23
HMGN4-201ENST00000377575 RPE65Q16518 533 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 C4orf22Q6V702 233 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 TAS2R42Q7RTR8 314 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 ARHGAP22Q7Z5H3 698 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 HM13Q8TCT9 377 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 ART4Q93070 314 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.48■□□□□ 0.23
HMGN4-201ENST00000377575 CDKN2AIPNLQ96HQ2 116 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 TEFMQ96QE5 360 aaKnown RBP16.48■□□□□ 0.23
HMGN4-201ENST00000377575 CCNL2Q96S94 520 aaPredicted RBP16.48■□□□□ 0.23
HMGN4-201ENST00000377575 ASPSCR1Q9BZE9 553 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 HOMER3Q9NSC5 361 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 SLC39A1Q9NY26 324 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 KLHL3Q9UH77 587 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 PSMD13Q9UNM6 376 aa16.48■□□□□ 0.23
HMGN4-201ENST00000377575 IGLV3-16A0A075B6K0 115 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 GOLGA6L3A6NEY3 463 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.47■□□□□ 0.23
HMGN4-201ENST00000377575 C9P02748 559 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 APRTP07741 180 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 MTHFD1P11586 935 aaKnown RBP16.47■□□□□ 0.23
HMGN4-201ENST00000377575 ETS1P14921 441 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
HMGN4-201ENST00000377575 GFERP55789 205 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 PLCL1Q15111 1095 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 DCAF12Q5T6F0 453 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 ARHGAP40Q5TG30 622 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 KLHL35Q6PF15 583 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 CCDC81Q6ZN84 652 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 GSTA5Q7RTV2 222 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 SERPINA9Q86WD7 417 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 GPR150Q8NGU9 434 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 RANBP9Q96S59 729 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 WWP1Q9H0M0 922 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 IMP3Q9NV31 184 aaKnown RBP16.47■□□□□ 0.23
HMGN4-201ENST00000377575 OCIAD1Q9NX40 245 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 OGFRQ9NZT2 677 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 FAM8A1Q9UBU6 413 aa16.47■□□□□ 0.23
HMGN4-201ENST00000377575 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
HMGN4-201ENST00000377575 C17orf113A0A1B0GUU1 675 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 TOX3O15405 576 aaPredicted RBP16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CAPN5O15484 640 aaPredicted RBP16.46■□□□□ 0.23
HMGN4-201ENST00000377575 SGTAO43765 313 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 PSMA3P25788 255 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CXCR5P32302 372 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 ATP1A2P50993 1020 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CCDC38Q502W7 563 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 MANEAQ5SRI9 462 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CEACAM20Q6UY09 585 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 NLRP9Q7RTR0 991 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 ZFAND4Q86XD8 727 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 BMPERQ8N8U9 685 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 NAT14Q8WUY8 206 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 SNRNP27Q8WVK2 155 aaKnown RBP16.46■□□□□ 0.23
HMGN4-201ENST00000377575 RSC1A1Q92681 617 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 ZDHHC12Q96GR4 267 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 C9orf72Q96LT7 481 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 C12orf66Q96MD2 445 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 TGM7Q96PF1 710 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 ZPBPQ9BS86 351 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CCM2Q9BSQ5 444 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CASS4Q9NQ75 786 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 EIF2B3Q9NR50 452 aaKnown RBP16.46■□□□□ 0.23
HMGN4-201ENST00000377575 RIMKLBQ9ULI2 386 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 JRKLQ9Y4A0 524 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 HEBP2Q9Y5Z4 205 aa16.46■□□□□ 0.23
HMGN4-201ENST00000377575 CCDC78A2IDD5 438 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 K7ENP7 123 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 QSOX1O00391 747 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 RASSF9O75901 435 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 AP2A2O94973 939 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 GSTM1P09488 218 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 ADRA1DP25100 572 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 RPL22P35268 128 aaKnown RBP16.45■□□□□ 0.22
HMGN4-201ENST00000377575 NSG1P42857 185 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 CDKN1CP49918 316 aaPredicted RBP16.45■□□□□ 0.22
HMGN4-201ENST00000377575 BASP1P80723 227 aaKnown RBP16.45■□□□□ 0.22
HMGN4-201ENST00000377575 MC2RQ01718 297 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 RHDQ02161 417 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 GSTM4Q03013 218 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 ITIH4Q14624 930 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 DBN1Q16643 649 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 ZNF449Q6P9G9 518 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 INO80CQ6PI98 192 aaPredicted RBP16.45■□□□□ 0.22
HMGN4-201ENST00000377575 AFTPHQ6ULP2 937 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 PRSS42Q7Z5A4 293 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 CFAP206Q8IYR0 622 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 GLIS1Q8NBF1 620 aa16.45■□□□□ 0.22
HMGN4-201ENST00000377575 PPHLN1Q8NEY8 458 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms