RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SPC25Q9HBM1 224 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 ADGRE2Q9UHX3 823 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 PCTPQ9UKL6 214 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 CSADQ9Y600 493 aa16.3■□□□□ 0.2
TRIM39-201ENST00000376656 UBA6A0AVT1 1052 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 NPEPPSL1A6NEC2 478 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 TTC34A8MYJ7 566 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 DFNA5O60443 496 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 HAPLN1P10915 354 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 CD6P30203 668 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 TXNDC11Q6PKC3 985 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 LINC00299Q6ZSB3 139 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 Q8N9G6 341 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 YIPF6Q96EC8 236 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 ACTR8Q9H981 624 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 ATP11BQ9Y2G3 1177 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 GSTA4O15217 222 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 RHOBTB1O94844 696 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 G6PDP11413 515 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 S100A1P23297 94 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 CD40LGP29965 261 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 FMO3P31513 532 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 LHX1P48742 406 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 NKX2-5P52952 324 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 IL5RAQ01344 420 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 RAPSNQ13702 412 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 DGCR6Q14129 220 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 CCDC81Q6ZN84 652 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 LGI2Q8N0V4 545 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 PSMA8Q8TAA3 256 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 FUBP1Q96AE4 644 aaKnown RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 HMCESQ96FZ2 354 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 NECTIN3Q9NQS3 549 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 VAPAQ9P0L0 249 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 HS3ST4Q9Y661 456 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 U3KQV3 271 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 MMP3P08254 477 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 ACVR2AP27037 513 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 SERPINB10P48595 397 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 RENBPP51606 427 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 AFF1P51825 1210 aaKnown RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 MARC1Q5VT66 337 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 MRNIPQ6NTE8 343 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 C3orf58Q8NDZ4 430 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 OR2T12Q8NG77 320 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 OR10A6Q8NH74 314 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 HTRA1Q92743 480 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 NSMCE3Q96MG7 304 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 ZNF300Q96RE9 604 aaPredicted RBP16.29■□□□□ 0.2
TRIM39-201ENST00000376656 POPDC3Q9HBV1 291 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 CSNK1G1Q9HCP0 422 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 MED16Q9Y2X0 877 aa16.29■□□□□ 0.2
TRIM39-201ENST00000376656 PRMT5O14744 637 aaPredicted RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PRKD3O94806 890 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 FMO4P31512 558 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 GRIK1P39086 918 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 DCTP40126 519 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 HNRNPFP52597 415 aaKnown RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 BRMS1LQ5PSV4 323 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PAGE2Q7Z2X7 111 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 P2RY8Q86VZ1 359 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 ARMC8Q8IUR7 673 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 SVOPLQ8N434 492 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 TRIB2Q92519 343 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 EMID1Q96A84 441 aaPredicted RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 KLHL3Q9UH77 587 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 TMEFF2Q9UIK5 374 aaPredicted RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 C3orf18Q9UK00 162 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 MITFO75030 526 aaPredicted RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 ANGPTL1O95841 491 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 FTH1P02794 183 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 CCDC159P0C7I6 412 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PFKLP17858 780 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 SERPINB1P30740 379 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 HTR6P50406 440 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PWP1Q13610 501 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 ACOX1Q15067 660 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 ATAD3BQ5T9A4 648 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 LAIR1Q6GTX8 287 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 RPL3LQ92901 407 aaKnown RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 RHNO1Q9BSD3 238 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 DERL2Q9GZP9 239 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 IKZF5Q9H5V7 419 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 GORASP2Q9H8Y8 452 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 CATSPERZQ9NTU4 200 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 EIF2B4Q9UI10 523 aaKnown RBP16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PCDHGB1Q9Y5G3 927 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PCDHGA10Q9Y5H3 936 aa16.28■□□□□ 0.2
TRIM39-201ENST00000376656 PSMD11O00231 422 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 BCKDKO14874 412 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 SEC24AO95486 1093 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 PSMB9P28065 219 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms