RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SOX1	O00570	391 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	IGHA2	P01877	340 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ATP1B2	P14415	290 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	TIMP2	P16035	220 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	CTSC	P53634	463 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	TMEM215	Q68D42	235 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	FAM180B	Q6P0A1	224 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	KDELC1	Q6UW63	502 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	TRPM8	Q7Z2W7	1104 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	GJD3	Q8N144	294 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	NXPE1	Q8N323	547 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	METTL27	Q8N6F8	245 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ZNF781	Q8N8C0	355 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	TFG	Q92734	400 aa	Predicted RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ARRDC3	Q96B67	414 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	SCRN2	Q96FV2	425 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	APOLD1	Q96LR9	279 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	RDH14	Q9HBH5	336 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	TM7SF3	Q9NS93	570 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	STARD13	Q9Y3M8	1113 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ANKDD1B	A6NHY2	528 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	PLIN3	O60664	434 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	CYP7B1	O75881	506 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	SEMA4F	O95754	770 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	PTGER3	P43115	390 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	STC1	P52823	247 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ABCE1	P61221	599 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	RASA2	Q15283	850 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	USP39	Q53GS9	565 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	SLC26A7	Q8TE54	656 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	ANKRD49	Q8WVL7	239 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	AARSD1	Q9BTE6	412 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	COPG2	Q9UBF2	871 aa		13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	RRP15	Q9Y3B9	282 aa	Known RBP	13.34	□□□□□ -0.27
DDR1-225	ENST00000376568	LOXHD1	Q8IVV2	1947 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ALDOA	P04075	364 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ABHD2	P08910	425 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	HGF	P14210	728 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ADIPOR2	Q86V24	386 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	KLHDC7B	Q96G42	594 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC38A3	Q99624	504 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	KCTD5	Q9NXV2	234 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	STOX2	Q9P2F5	926 aa	Predicted RBP	13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	BAG5	Q9UL15	447 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	LOC285556	D6RIA3	1793 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	TM9SF1	O15321	606 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ALOX15	P16050	662 aa	Predicted RBP	13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	CDH3	P22223	829 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	SPINT3	P49223	89 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	CERS6	Q6ZMG9	384 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	OR56A4	Q8NGH8	313 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	SLCO2A1	Q92959	643 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	MIPEP	Q99797	713 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	IL21R	Q9HBE5	538 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ZDHHC3	Q9NYG2	299 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	SIT1	Q9Y3P8	196 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	PTGDR2	Q9Y5Y4	395 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568		A0A0J9YVX5	310 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	UBD	O15205	165 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	PDE5A	O76074	875 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	GSN	P06396	782 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	TNFRSF8	P28908	595 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	CXCL12	P48061	93 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	PKNOX1	P55347	436 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ACSM2A	Q08AH3	577 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	CHIT1	Q13231	466 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	ACSM2B	Q68CK6	577 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	BEND5	Q7L4P6	421 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	LIMS2	Q7Z4I7	341 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	KCT2	Q8NC54	265 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	NCSTN	Q92542	709 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	GLYATL1	Q969I3	302 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	VWCE	Q96DN2	955 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	MACROD1	Q9BQ69	325 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	MRPL57	Q9BQC6	102 aa	Known RBP	13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	KIFC1	Q9BW19	673 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	PPCS	Q9HAB8	311 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	THAP1	Q9NVV9	213 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	KCNE2	Q9Y6J6	123 aa		13.33	□□□□□ -0.28
DDR1-225	ENST00000376568	NUP214	P35658	2090 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	ZCWPW2	A0A1B0GU75	182 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	FCHO1	O14526	889 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	ULK1	O75385	1050 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	STK16	O75716	305 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	EIF4H	Q15056	248 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	TBCC	Q15814	346 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	CCDC153	Q494R4	210 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	ADAMTSL2	Q86TH1	951 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	TBC1D17	Q9HA65	648 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	CD93	Q9NPY3	652 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	EIF2B3	Q9NR50	452 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	RGSL1	A5PLK6	1076 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	HMGCL	P35914	325 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	SKIV2L2	P42285	1042 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	SRSF5	Q13243	272 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	PPP4R4	Q6NUP7	873 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	LIPI	Q6XZB0	460 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	GATAD2A	Q86YP4	633 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	NRSN1	Q8IZ57	195 aa		13.32	□□□□□ -0.28

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