RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CAPNS1P04632 268 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 PRDX3P30048 256 aaKnown RBP13.79□□□□□ -0.2
MSH5-202ENST00000375740 CA5AP35218 305 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 BCAP31P51572 246 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CLCN7P51798 805 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 LMAN2Q12907 356 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 FAM151BQ6UXP7 276 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 GPR180Q86V85 440 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 LRTOMTQ8WZ04 291 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 FBXL8Q96CD0 374 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 TUBGCP3Q96CW5 907 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CCDC97Q96F63 343 aaPredicted RBP13.79□□□□□ -0.2
MSH5-202ENST00000375740 VPS50Q96JG6 964 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 HEPHQ9BQS7 1158 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 LRRC3Q9BY71 257 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
MSH5-202ENST00000375740 MAFFQ9ULX9 164 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 COMMD10Q9Y6G5 202 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 LTBP2Q14767 1821 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 ANKRD12Q6UB98 2062 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CRCPO75575 148 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 ACRP10323 421 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CD70P32970 193 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 NUP107P57740 925 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 TXNL4AP83876 142 aaKnown RBP13.79□□□□□ -0.2
MSH5-202ENST00000375740 BCL2L1Q07817 233 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 UGT3A1Q6NUS8 523 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 TXNDC11Q6PKC3 985 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 SYVN1Q86TM6 617 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CARM1Q86X55 608 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 STK40Q8N2I9 435 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 HGH1Q9BTY7 390 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 C1QTNF3Q9BXJ4 246 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 TNKS2Q9H2K2 1166 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 CD274Q9NZQ7 290 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 POLG2Q9UHN1 485 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
MSH5-202ENST00000375740 PCTPQ9UKL6 214 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 ASB1Q9Y576 335 aa13.79□□□□□ -0.2
MSH5-202ENST00000375740 A0A1W2PPW3 197 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 SNX2O60749 519 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 HGFP14210 728 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 LBPP18428 481 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 PSMD8P48556 350 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 TMC8Q8IU68 726 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 ACDQ96AP0 544 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 PLEKHA8Q96JA3 519 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 GPATCH1Q9BRR8 931 aaKnown RBP13.78□□□□□ -0.2
MSH5-202ENST00000375740 PCDHAC1Q9H158 963 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 ZNF225Q9UK10 706 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 CROTQ9UKG9 612 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 MYRFQ9Y2G1 1151 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 DHRS7Q9Y394 339 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 A0A0J9YYE9 177 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 C1orf232A0A0U1RR37 186 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 A0A1W2PRU2 124 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 A8MX80 341 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 PRMT5O14744 637 aaPredicted RBP13.78□□□□□ -0.2
MSH5-202ENST00000375740 CLDN7O95471 211 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 LRG1P02750 347 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 HNF1BP35680 557 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 SLC7A9P82251 487 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 MPPE1Q53F39 396 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 FGD3Q5JSP0 725 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 ZFP1Q6P2D0 407 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 CERS6Q6ZMG9 384 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 NAA50Q9GZZ1 169 aaKnown RBP13.78□□□□□ -0.2
MSH5-202ENST00000375740 SMG9Q9H0W8 520 aaKnown RBP13.78□□□□□ -0.2
MSH5-202ENST00000375740 TBC1D23Q9NUY8 699 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 DENND4CQ5VZ89 1909 aa13.78□□□□□ -0.2
MSH5-202ENST00000375740 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 GAPDHSO14556 408 aaPredicted RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 TRIM24O15164 1050 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 HTRA2O43464 458 aaPredicted RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 ZNF821O75541 412 aaPredicted RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 FGF18O76093 207 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 PRAMEF1O95521 474 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 TRBC1P01850 177 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 ITGB6P18564 788 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 RALGDSQ12967 914 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 BNIP3Q12983 259 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 TRIM25Q14258 630 aaKnown RBP13.77□□□□□ -0.2
MSH5-202ENST00000375740 RBBP7Q16576 425 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 KRT80Q6KB66 452 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 RETREG3Q86VR2 466 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 MIER2Q8N344 545 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 CPXM2Q8N436 756 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 FIBINQ8TAL6 211 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 FAM110BQ8TC76 370 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 TANKQ92844 425 aa13.77□□□□□ -0.2
MSH5-202ENST00000375740 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.77□□□□□ -0.2
MSH5-202ENST00000375740 ASB9Q96DX5 294 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms