RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZDHHC2Q9UIJ5 367 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 DUSP12Q9UNI6 340 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ANXA6P08133 673 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 RPL10P27635 214 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 VIPR2P41587 438 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 PRKCQQ04759 706 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 CCNYL2Q5T2Q4 361 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 INTS11Q5TA45 600 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 FAM171BQ6P995 826 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 TAF8Q7Z7C8 310 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 RAD51AP1Q96B01 352 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ITCHQ96J02 903 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 SGIP1Q9BQI5 828 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 CCDC177Q9NQR7 707 aaPredicted RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 USE1Q9NZ43 259 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ABLIM1O14639 778 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 RGS5O15539 181 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 OR1I1O60431 355 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 RFPL1O75677 317 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 BMP10O95393 424 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 SLC18A2Q05940 514 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 GPAT3Q53EU6 434 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 DEPDC1Q5TB30 811 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 AMZ2Q86W34 360 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 AHI1Q8N157 1196 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 IMP4Q96G21 291 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 TFB2MQ9H5Q4 396 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 WDR6Q9NNW5 1121 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ZDHHC3Q9NYG2 299 aa17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 CNOT6Q9ULM6 557 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
PTPDC1-202ENST00000375360 ADAM12O43184 909 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 OR10H2O60403 315 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 NOS3P29474 1203 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 STC1P52823 247 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 ILF3Q12906 894 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 WFIKKN2Q8TEU8 576 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 EQTNQ9NQ60 294 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 FAM149AA5PLN7 773 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 ZNF487B1APH4 448 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 NPHS1O60500 1241 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 CST1P01037 141 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 IMPDH1P20839 514 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 PLA2G16P53816 162 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 NIPAL4Q0D2K0 466 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 SCAPQ12770 1279 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 GRSF1Q12849 480 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 SPATA19Q7Z5L4 167 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 TCAIMQ8N3R3 496 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 STX19Q8N4C7 294 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 VMP1Q96GC9 406 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 C12orf66Q96MD2 445 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 ZNF229Q9UJW7 825 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 USP54Q70EL1 1684 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 SAP18O00422 153 aaKnown RBP17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 KHDC1Q4VXA5 237 aaKnown RBP17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 GLYATQ6IB77 296 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 SIPA1Q96FS4 1042 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 HIC2Q96JB3 615 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 BACE2Q9Y5Z0 518 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 LRP5O75197 1615 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 A0A0U1RQS6 177 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 ALDOAP04075 364 aaKnown RBP17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 GNAZP19086 355 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 LACTB2Q53H82 288 aaPredicted RBP17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 MTX3Q5HYI7 312 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 TRNP1Q6NT89 227 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 BRAT1Q6PJG6 821 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 LCN9Q8WX39 176 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 ADGRE2Q9UHX3 823 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 LZTS1Q9Y250 596 aa17.71■□□□□ 0.43
PTPDC1-202ENST00000375360 EVPLQ92817 2033 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 OR1F1O43749 312 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 DLDP09622 509 aaKnown RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 ATP6V1C1P21283 382 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 S100A5P33763 92 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 HERVK_113P63132 956 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 C9orf64Q5T6V5 341 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 PM20D1Q6GTS8 502 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 BNIPLQ7Z465 357 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 XAGE5Q8WWM1 108 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 DCUN1D5Q9BTE7 237 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 ERVK-6Q9BXR3 956 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 NSUN3Q9H649 340 aaKnown RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 K7EPI3 171 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 PGM3O95394 542 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 ARSDP51689 593 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 SKP1P63208 163 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 EIF2B5Q13144 721 aaKnown RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 FAM174BQ3ZCQ3 159 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 ZNF655Q8N720 491 aaPredicted RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 EXOSC8Q96B26 276 aaKnown RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 CIB1Q99828 191 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 GIMAP2Q9UG22 337 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 SLC22A14Q9Y267 594 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 EPOP01588 193 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 ACTR1BP42025 376 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 ACTR1AP61163 376 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms