RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF683Q8IZ20 524 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 PHACTR4Q8IZ21 702 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 PQLC1Q8N2U9 271 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 KRTCAP2Q8N6L1 136 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 BADQ92934 168 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 OSBPL10Q9BXB5 764 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 TUBB1Q9H4B7 451 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CWH43Q9H720 699 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CACNA2D2Q9NY47 1150 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF212Q9UDV6 495 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 AP4S1Q9Y587 144 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 LRRC37A2A6NM11 1700 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ILVBLA1L0T0 632 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 FBP2O00757 339 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 LATO43561 262 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 SH3BP5O60239 455 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 CPSF4O95639 269 aaKnown RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 G6PDP11413 515 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF23P17027 643 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF7P17097 686 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 LBPP18428 481 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 HK3P52790 923 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 IST1P53990 364 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 MEF2AQ02078 507 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 MRPL58Q14197 206 aaKnown RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 FAM26DQ5JW98 314 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 ZSWIM9Q86XI8 627 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 HJURPQ8NCD3 748 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 OR4F6Q8NGB9 312 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 SLC35B4Q969S0 331 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 MRGBPQ9NV56 204 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 MKS1Q9NXB0 559 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 N6AMT1Q9Y5N5 214 aa10.66□□□□□ -0.7
CXCL12-203ENST00000374429 MAGED1Q9Y5V3 778 aaPredicted RBP10.66□□□□□ -0.7
CXCL12-203ENST00000374429 TMEM221A6NGB7 291 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 MROH6A6NGR9 719 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 DRGXA6NNA5 263 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 GLUD1P00367 558 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 MTHFD2P13995 350 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 IRF5Q13568 498 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TAF1AQ15573 450 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-203ENST00000374429 PABPC1LQ4VXU2 614 aaKnown RBP10.65□□□□□ -0.7
CXCL12-203ENST00000374429 FAAH2Q6GMR7 532 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SLC8B1Q6J4K2 584 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 LETMD1Q6P1Q0 360 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 KIAA0408Q6ZU52 694 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF554Q86TJ5 538 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SFTPA1Q8IWL2 248 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 GPR26Q8NDV2 337 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 MAGEE2Q8TD90 523 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-203ENST00000374429 ELMO1Q92556 727 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 ZSWIM3Q96MP5 696 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TMEM79Q9BSE2 394 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 COQ10BQ9H8M1 238 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 PRELID1Q9Y255 219 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TRAV19A0A0A6YYK7 116 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 GMNNO75496 209 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 RPLP2P05387 115 aaKnown RBP10.65□□□□□ -0.7
CXCL12-203ENST00000374429 LYNP07948 512 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TYRP14679 529 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 BPIP17213 487 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 NR4A1P22736 598 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SERPINA4P29622 427 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 DGKEP52429 567 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TBCCQ15814 346 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SMUG1Q53HV7 270 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 PAGE3Q5JUK9 113 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 CTSL3PQ5NE16 218 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SATL1Q86VE3 508 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 LRRC49Q8IUZ0 686 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 LILRA2Q8N149 483 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 ZNF786Q8N393 782 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TRIML2Q8N7C3 387 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 POF1BQ8WVV4 589 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 TRIM43Q96BQ3 446 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-203ENST00000374429 CCDC126Q96EE4 140 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 ATP13A3Q9H7F0 1226 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SPAG4Q9NPE6 437 aa10.65□□□□□ -0.7
CXCL12-203ENST00000374429 MRPS23Q9Y3D9 190 aaKnown RBP10.65□□□□□ -0.7
CXCL12-203ENST00000374429 SIP14410 1827 aa10.65□□□□□ -0.71
CXCL12-203ENST00000374429 TRBV23OR9-2A0A075B6M9 112 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TMEM247A6NEH6 219 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 DIRAS1O95057 198 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 IGSF6O95976 241 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 NNMTP40261 264 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 MTTPP55157 894 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 MESP2Q0VG99 397 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 FRG1Q14331 258 aaKnown RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 ABRAXAS2Q15018 415 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 PDK3Q15120 406 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 PLEKHG6Q3KR16 790 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 GTDC1Q4AE62 458 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RFTN2Q52LD8 501 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TCEAL5Q5H9L2 206 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TMEM214Q6NUQ4 689 aaKnown RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TRAPPC5Q8IUR0 188 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms