RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 METTL7BQ6UX53 244 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 B3GNT8Q7Z7M8 397 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
SNX12-202ENST00000374274 HORMAD1Q86X24 394 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNX12-202ENST00000374274 FAM149B1Q96BN6 582 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 CCDC32Q9BV29 185 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 GABARAPL1Q9H0R8 117 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 POPDC3Q9HBV1 291 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 INTS7Q9NVH2 962 aaKnown RBP13.25□□□□□ -0.29
SNX12-202ENST00000374274 UBP1Q9NZI7 540 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 CAB39Q9Y376 341 aaPredicted RBP13.25□□□□□ -0.29
SNX12-202ENST00000374274 PEX16Q9Y5Y5 336 aa13.25□□□□□ -0.29
SNX12-202ENST00000374274 C9JVG2 144 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 LOC110117498-PIK3R3F6TDL0 507 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 HS6ST1O60243 411 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 CD36P16671 472 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 RRM2P31350 389 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 DIO3P55073 304 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 OR2B6P58173 313 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 ERVK-8P63133 956 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 CSNK2BP67870 215 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 IL5RAQ01344 420 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 LCP2Q13094 533 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PRKG2Q13237 762 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 KCTD2Q14681 263 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 TPRG1LQ5T0D9 272 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 CES5AQ6NT32 575 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PIK3R3Q92569 461 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 TMEM209Q96SK2 561 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PIGVQ9NUD9 493 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 ZNF638Q14966 1978 aaKnown RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 FAM72CH0Y354 149 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 GNGT2O14610 69 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 SLC7A4O43246 635 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 XPNPEP2O43895 674 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 NOBOXO60393 691 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 MFN2O95140 757 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PAPSS2O95340 614 aaPredicted RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 TSPAN8P19075 237 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 CCNCP24863 283 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PKLRP30613 574 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 NUDT1P36639 197 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 DCTP40126 519 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 AMHR2Q16671 573 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 FAM72AQ5TYM5 149 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 FAM72DQ6L9T8 149 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 SPESP1Q6UW49 350 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 DLEU7Q6UYE1 221 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 FAM72BQ86X60 149 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 GALNT12Q8IXK2 581 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PTGR2Q8N8N7 351 aaPredicted RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 LSM14AQ8ND56 463 aaKnown RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 OR6B3Q8NGW1 331 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 KCTD13Q8WZ19 329 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 RMDN1Q96DB5 314 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 SLC47A1Q96FL8 570 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 PDLIM5Q96HC4 596 aaKnown RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 ITPAQ9BY32 194 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 RBPJLQ9UBG7 517 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 GIMAP2Q9UG22 337 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 SLC2A6Q9UGQ3 507 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 TMEFF2Q9UIK5 374 aaPredicted RBP13.24□□□□□ -0.29
SNX12-202ENST00000374274 PRELID1Q9Y255 219 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 BTRCQ9Y297 605 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 PTGDR2Q9Y5Y4 395 aa13.24□□□□□ -0.29
SNX12-202ENST00000374274 ZBBXA8MT70 800 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 CAPN5O15484 640 aaPredicted RBP13.23□□□□□ -0.29
SNX12-202ENST00000374274 SCELO95171 688 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 LINC00032P0C843 101 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 PCNAP12004 261 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 EFNA1P20827 205 aaPredicted RBP13.23□□□□□ -0.29
SNX12-202ENST00000374274 ADORA2BP29275 332 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 MAP2K4P45985 399 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 CLK1P49759 484 aaKnown RBP13.23□□□□□ -0.29
SNX12-202ENST00000374274 CDH13P55290 713 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 FOXA1P55317 472 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 MFSD10Q14728 455 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 EML3Q32P44 896 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 GAD1Q99259 594 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 GDF15Q99988 308 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 DHRS9Q9BPW9 319 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 FICDQ9BVA6 458 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 R3HDMLQ9H3Y0 253 aa13.23□□□□□ -0.29
SNX12-202ENST00000374274 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms