RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TMEM199Q8N511 208 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 DTWD1Q8N5C7 304 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 NSUN6Q8TEA1 469 aaKnown RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 CENPIQ92674 756 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 DPF3Q92784 378 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SLC38A4Q969I6 547 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 PYCR2Q96C36 320 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 SDHCQ99643 169 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 C11orf84Q9BUA3 381 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 MLPHQ9BV36 600 aaPredicted RBP12.76□□□□□ -0.37
PRPF4-201ENST00000374198 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 RAPGEFL1Q9UHV5 662 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 FBXO10Q9UK96 956 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 NUP50Q9UKX7 468 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
PRPF4-201ENST00000374198 PNMA8CA0A1B0GUJ8 204 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 OR2A25A4D2G3 310 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ERI2A8K979 691 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 RGS10O43665 173 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 NOS1APO75052 506 aaPredicted RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ANXA6P08133 673 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CYP2B6P20813 491 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 TKTL1P51854 596 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SLC12A2P55011 1212 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 DENND5AQ6IQ26 1287 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CNTN4Q8IWV2 1026 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 TMEM130Q8N3G9 435 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 FYTTD1Q96QD9 318 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 UGT2B28Q9BY64 529 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ROGDIQ9GZN7 287 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 C14orf119Q9NWQ9 140 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 INVSQ9Y283 1065 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PCDHB14Q9Y5E9 798 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PEX16Q9Y5Y5 336 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 MEIOCA2RUB1 952 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 LOC110117498-PIK3R3F6TDL0 507 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 GNGT2O14610 69 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 GOT2P00505 430 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 FTH1P02794 183 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 LCKP06239 509 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 HGFP14210 728 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 GLULP15104 373 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 LBPP18428 481 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PRKACGP22612 351 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 IL32P24001 234 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CASP2P42575 452 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SLC9A3P48764 834 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 POU6F2P78424 691 aaPredicted RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 LAPTM5Q13571 262 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 VGLL4Q14135 290 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 RCAN2Q14206 197 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SPANXN2Q5MJ10 180 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 AGAP9Q5VTM2 703 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SPRYD7Q5W111 196 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SDE2Q6IQ49 451 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 TP53INP2Q8IXH6 220 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CACTIN-AS1Q8N1I8 211 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SLC7A6Q92536 515 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ITCHQ96J02 903 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 RHNO1Q9BSD3 238 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 KIFC1Q9BW19 673 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 B3GNT5Q9BYG0 378 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ENTPD7Q9NQZ7 604 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 INTS7Q9NVH2 962 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 COMMD8Q9NX08 183 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 AASSQ9UDR5 926 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 SIP14410 1827 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PCM1Q15154 2024 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 TRIM77I1YAP6 450 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 TSPAN1O60635 241 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PGK2P07205 417 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ETV6P41212 452 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 PRIM2P49643 509 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CXCR4P61073 352 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 C5orf22Q49AR2 442 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 GPAT3Q53EU6 434 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 LAIR1Q6GTX8 287 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ZNF540Q8NDQ6 660 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 TWIST2Q8WVJ9 160 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 MARVELD3Q96A59 401 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 OR2A14Q96R47 310 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CCDC32Q9BV29 185 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 CARS2Q9HA77 564 aaKnown RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 RCOR3Q9P2K3 495 aaPredicted RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 EVLQ9UI08 416 aaPredicted RBP12.75□□□□□ -0.37
PRPF4-201ENST00000374198 GPR45Q9Y5Y3 372 aa12.75□□□□□ -0.37
PRPF4-201ENST00000374198 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 C1RP00736 705 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 HOXD8P13378 290 aaPredicted RBP12.74□□□□□ -0.37
PRPF4-201ENST00000374198 CBLP22681 906 aa12.74□□□□□ -0.37
PRPF4-201ENST00000374198 UQCRC1P31930 480 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms