RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PPP1R3AQ16821 1122 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF678Q5SXM1 525 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 TMEM135Q86UB9 458 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 CILP2Q8IUL8 1156 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 PPCDCQ96CD2 204 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 SSR3Q9UNL2 185 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 MYOCOSA0A1B0GUC4 107 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 PIRO00625 290 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 TMCC2O75069 709 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 PRPS2P11908 318 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 ALDH4A1P30038 563 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 SGK2Q9HBY8 427 aa17.2■□□□□ 0.34
PTPRU-202ENST00000373779 A0A1W2PP18 115 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 hCG_2039718K7EN88 272 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 TOR1BO14657 336 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 C4BPBP20851 252 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 MAGP20916 626 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 ATN1P54259 1190 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 MZT2AQ6P582 158 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 FBXL20Q96IG2 436 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 FBRSL1Q9HCM7 1045 aaKnown RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 KLHL1Q9NR64 748 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CAPN14A8MX76 684 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 J3KR12 359 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 TNFRSF11BO00300 401 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 PLK4O00444 970 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CLTBP09497 229 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 GMPRP36959 345 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CTU1Q7Z7A3 348 aaKnown RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CGREF1Q99674 301 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 AARSD1Q9BTE6 412 aaKnown RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF696Q9H7X3 374 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 EVLQ9UI08 416 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 HS3ST4Q9Y661 456 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 A0A1B0GVM2 712 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 TCAF2A6NFQ2 919 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 NT5C1B-RDH14C9J2C7 533 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 AIREO43918 545 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 COL6A1P12109 1028 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 GM2AP17900 193 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 PYDC2Q56P42 97 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 PIH1D2Q8WWB5 315 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 MOCOSQ96EN8 888 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CDKN2AIPNLQ96HQ2 116 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 KAT8Q9H7Z6 458 aaKnown RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 MIOSQ9NXC5 875 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 DCLK1O15075 740 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 PQBP1O60828 265 aaKnown RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 NTSP30990 170 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 RPS14P62263 151 aaKnown RBP17.19■□□□□ 0.34
PTPRU-202ENST00000373779 SULT2A1Q06520 285 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 SPATS1Q496A3 300 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 OLFM1Q99784 485 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 CRISPLD1Q9H336 500 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 GTF2IRD1Q9UHL9 959 aa17.19■□□□□ 0.34
PTPRU-202ENST00000373779 IGKV6D-21A0A0A0MT36 114 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 C9IYK1 514 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 NIPSNAP2O75323 286 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 ATP6V1G1O75348 118 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 SLC35E2BP0CK96 405 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 GJA9P57773 515 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 FBXW4P57775 412 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 PITX1P78337 314 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-202ENST00000373779 LSAMPQ13449 338 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 BTG3Q14201 252 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-202ENST00000373779 QPRTQ15274 297 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 MYLK3Q32MK0 819 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 NAPRTQ6XQN6 538 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 UTS2BQ765I0 119 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 CACTIN-AS1Q8N1I8 211 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 ARFGAP1Q8N6T3 406 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF557Q8N988 423 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-202ENST00000373779 TRAV19A0A0A6YYK7 116 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 KRT87PA6NCN2 255 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 FEN1P39748 380 aaKnown RBP17.18■□□□□ 0.34
PTPRU-202ENST00000373779 UFM1P61960 85 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 DOK6Q6PKX4 331 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF467Q7Z7K2 595 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-202ENST00000373779 DPP10Q8N608 796 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 DNAJB8Q8NHS0 232 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 BTN2A2Q8WVV5 523 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 MRPL48Q96GC5 212 aaKnown RBP17.18■□□□□ 0.34
PTPRU-202ENST00000373779 SMOC2Q9H3U7 446 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 TXNRD2Q9NNW7 524 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 OR1D2P34982 312 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 ASMTP46597 345 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 SLC2A7Q6PXP3 512 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 BLVRAP53004 296 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF423Q2M1K9 1284 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 RABL3Q5HYI8 236 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 CHSY3Q70JA7 882 aa17.18■□□□□ 0.34
PTPRU-202ENST00000373779 SLC24A5Q71RS6 500 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms