RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 NAT9Q9BTE0 207 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 SLC13A1Q9BZW2 595 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 CA5BQ9Y2D0 317 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 PIEZO1Q92508 2521 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 SMIM31A0A1B0GVY4 71 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 HMX2A2RU54 273 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 PSMD11O00231 422 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 LZTS3O60299 673 aaPredicted RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 FOXD2O60548 495 aaPredicted RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 WNT1P04628 370 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 APRTP07741 180 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 ATXN1LP0C7T5 689 aaKnown RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 ZNF30P17039 623 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 RPS6KA3P51812 740 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 ALDH18A1P54886 795 aaKnown RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 SEMA5AQ13591 1074 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 ARHGEF7Q14155 803 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 TEAD4Q15561 434 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 TEDDM1Q5T9Z0 273 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 LRRC66Q68CR7 880 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 LAYNQ6UX15 382 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 TMEM126BQ8IUX1 230 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 TAB3Q8N5C8 712 aaPredicted RBP20.25■□□□□ 0.83
SYNC-201ENST00000373484 STON2Q8WXE9 905 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 C1QTNF7Q9BXJ2 289 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 KLHL4Q9C0H6 718 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 PCMTD2Q9NV79 361 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 HS3ST3A1Q9Y663 406 aa20.25■□□□□ 0.83
SYNC-201ENST00000373484 KNL1Q8NG31 2342 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 MYLKQ15746 1914 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 A0A0U1RQS6 177 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 LNP1A1A4G5 178 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 VILLO15195 856 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 UQCRBP14927 111 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 ADRA1AP35348 466 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 POLE2P56282 527 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 FASTKD1Q53R41 847 aaKnown RBP20.24■□□□□ 0.83
SYNC-201ENST00000373484 GCNT7Q6ZNI0 430 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 MFSD2AQ8NA29 543 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 TP53I13Q8NBR0 393 aaPredicted RBP20.24■□□□□ 0.83
SYNC-201ENST00000373484 PPP1R14CQ8TAE6 165 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 PPP4R1Q8TF05 950 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 CDKL2Q92772 493 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 COQ10AQ96MF6 247 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 FSD1LQ9BXM9 530 aa20.24■□□□□ 0.83
SYNC-201ENST00000373484 H0Y8X5 98 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 RECQL5O94762 991 aaPredicted RBP20.23■□□□□ 0.83
SYNC-201ENST00000373484 HLA-DPA1P20036 260 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 GSTT1P30711 240 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 BIRC2Q13490 618 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 MED21Q13503 144 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 CDKN3Q16667 212 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 SIRPB2Q5JXA9 342 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 METTL21CQ5VZV1 264 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 KCTD11Q693B1 232 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 ZNF534Q76KX8 674 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 ABI3BPQ7Z7G0 1075 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 IQCHQ86VS3 1027 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 BMFQ96LC9 184 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 TTC1Q99614 292 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 MAGEE1Q9HCI5 957 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 FSCN3Q9NQT6 498 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 EIF2B3Q9NR50 452 aaKnown RBP20.23■□□□□ 0.83
SYNC-201ENST00000373484 PTPRZ1P23471 2315 aaPredicted RBP20.23■□□□□ 0.83
SYNC-201ENST00000373484 A0A1B0GVT2 93 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 FDFT1P37268 417 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 CHRNA4P43681 627 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 CLDN2P57739 230 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 BNC1Q01954 994 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 PTSQ03393 145 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 GRIK2Q13002 908 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 ITGA9Q13797 1035 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 ACOX1Q15067 660 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 FAXCQ5TGI0 409 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 RANBP10Q6VN20 620 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 HSD11B1LQ7Z5J1 315 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 FAM174AQ8TBP5 190 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 FICDQ9BVA6 458 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 ANKRD6Q9Y2G4 727 aa20.23■□□□□ 0.83
SYNC-201ENST00000373484 C1orf232A0A0U1RR37 186 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 POM121BA6NF01 834 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 ARHGAP33O14559 1287 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 FPGTO14772 594 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 PLIN3O60664 434 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 CLDN7O95471 211 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 BAG2O95816 211 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 FGF1P05230 155 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 SYPP08247 313 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 UBTFL6P0CB48 400 aaPredicted RBP20.22■□□□□ 0.83
SYNC-201ENST00000373484 FGF3P11487 239 aaPredicted RBP20.22■□□□□ 0.83
SYNC-201ENST00000373484 ENGP17813 658 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 IGFALSP35858 605 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 SLC1A6P48664 564 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 MTM1Q13496 603 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 WSCD2Q2TBF2 565 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 CNPY1Q3B7I2 92 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 SLC25A41Q8N5S1 370 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 ZDHHC5Q9C0B5 715 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 C20orf27Q9GZN8 174 aa20.22■□□□□ 0.83
SYNC-201ENST00000373484 MBNL1Q9NR56 388 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms