RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CHEK2O96017 543 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 ELFN1P0C7U0 828 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 UROSP10746 265 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 CD1EP15812 388 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 CCR7P32248 378 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 NUDT2P50583 147 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 ATP4BP51164 291 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 MAPRE2Q15555 327 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 ZNF284Q2VY69 593 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 TRMT5Q32P41 509 aaKnown RBP24.59■■□□□ 1.53
CTSA-203ENST00000372459 KHDC1Q4VXA5 237 aaKnown RBP24.59■■□□□ 1.53
CTSA-203ENST00000372459 C9orf64Q5T6V5 341 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 GPRIN3Q6ZVF9 776 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 TERB1Q8NA31 727 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 TMIEQ8NEW7 156 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 TIFAQ96CG3 184 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 ZNF382Q96SR6 550 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 PLXNA2O75051 1894 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 ANKRD12Q6UB98 2062 aa24.59■■□□□ 1.53
CTSA-203ENST00000372459 VPS4BO75351 444 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 HLA-EP13747 358 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 VCLP18206 1134 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 GCKP35557 465 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 PKNOX1P55347 436 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 FCHO2Q0JRZ9 810 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 ANKRD54Q6NXT1 300 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 SYCE2Q6PIF2 218 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 C16orf89Q6UX73 402 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 LIPIQ6XZB0 460 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 DET1Q7L5Y6 550 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 TECPR1Q7Z6L1 1165 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 KYQ8NBH2 561 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 RIOK2Q9BVS4 552 aaKnown RBP24.58■■□□□ 1.53
CTSA-203ENST00000372459 TUBB1Q9H4B7 451 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 RDH14Q9HBH5 336 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 PTBP2Q9UKA9 531 aaKnown RBP24.58■■□□□ 1.53
CTSA-203ENST00000372459 SARDHQ9UL12 918 aa24.58■■□□□ 1.53
CTSA-203ENST00000372459 KIF26AQ9ULI4 1882 aaPredicted RBP24.58■■□□□ 1.53
CTSA-203ENST00000372459 GUCA1CO95843 209 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 AOAHP28039 575 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 PRDX3P30048 256 aaKnown RBP24.58■■□□□ 1.52
CTSA-203ENST00000372459 RUNX3Q13761 415 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 ZNF234Q14588 700 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 UCMAQ8WVF2 138 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 EGFL8Q99944 293 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 PFDN4Q9NQP4 134 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 STOML1Q9UBI4 398 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 ZNF225Q9UK10 706 aa24.58■■□□□ 1.52
CTSA-203ENST00000372459 PSMD11O00231 422 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 PSMD12O00232 456 aaPredicted RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 ITGB7P26010 798 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 PTDSS1P48651 473 aaKnown RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 TBL3Q12788 808 aaKnown RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 FASTKQ14296 549 aaKnown RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 ELAVL3Q14576 367 aaKnown RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 GRIN2CQ14957 1233 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 SULT1C3Q6IMI6 304 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 YAF2Q8IY57 180 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 DDHD1Q8NEL9 900 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 PIP4K2CQ8TBX8 421 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 STMN2Q93045 179 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 RCN3Q96D15 328 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 NSUN3Q9H649 340 aaKnown RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 EFCAB1Q9HAE3 211 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 NDE1Q9NXR1 346 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 PPM1HQ9ULR3 514 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 TIMM22Q9Y584 194 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 PTGDR2Q9Y5Y4 395 aa24.57■■□□□ 1.52
CTSA-203ENST00000372459 MUC22E2RYF6 1773 aaPredicted RBP24.57■■□□□ 1.52
CTSA-203ENST00000372459 TBC1D3BA6NDS4 549 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 LINC01565O15544 149 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 AP2A2O94973 939 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 MSH3P20585 1137 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 STX1BP61266 288 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 HYAL1Q12794 435 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 PHKG1Q16816 387 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 C1orf146Q5VVC0 180 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 GOLGA7Q7Z5G4 137 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 NRSN1Q8IZ57 195 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 TUBGCP3Q96CW5 907 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 TMEM245Q9H330 911 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 NOL11Q9H8H0 719 aaKnown RBP24.56■■□□□ 1.52
CTSA-203ENST00000372459 BTRCQ9Y297 605 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 KIAA1549LQ6ZVL6 1849 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 H0Y858 1186 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 KPNA5O15131 536 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 CCNT2O60583 730 aaKnown RBP24.56■■□□□ 1.52
CTSA-203ENST00000372459 LINC00032P0C843 101 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 GTF2H2Q13888 395 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 PTK2BQ14289 1009 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 ACOX1Q15067 660 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 C18orf21Q32NC0 220 aaPredicted RBP24.56■■□□□ 1.52
CTSA-203ENST00000372459 GTF2H2CQ6P1K8 395 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 PGM2L1Q6PCE3 622 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 SERPINA13PQ6UXR4 307 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 DLG3Q92796 817 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 FBRSL1Q9HCM7 1045 aaKnown RBP24.56■■□□□ 1.52
CTSA-203ENST00000372459 POLG2Q9UHN1 485 aa24.56■■□□□ 1.52
CTSA-203ENST00000372459 FADS2P1A8MWK0 482 aa24.55■■□□□ 1.52
CTSA-203ENST00000372459 H0Y3Z8 333 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms