RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RHOAP61586 193 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 AP1S1P61966 158 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 ALDH6A1Q02252 535 aaKnown RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 SLC20A2Q08357 652 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 LMAN2Q12907 356 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 GRTP1Q5TC63 336 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 KIAA0930Q6ICG6 404 aaPredicted RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 PACS1Q6VY07 963 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 TIFABQ6ZNK6 161 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 CEP68Q76N32 757 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 ARID3BQ8IVW6 561 aaPredicted RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 CNTN4Q8IWV2 1026 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 SLC25A41Q8N5S1 370 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 DYDC1Q8WWB3 177 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 YIPF2Q9BWQ6 316 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 CDADC1Q9BWV3 514 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 TDRD1Q9BXT4 1180 aaKnown RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 ACSS2Q9NR19 701 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 SPHK2Q9NRA0 654 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 TREX1Q9NSU2 369 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 C20orf96Q9NUD7 363 aaPredicted RBP8.71□□□□□ -1.01
TPM3-213ENST00000368545 ABCB8Q9NUT2 735 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 PLK2Q9NYY3 685 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 TCFL5Q9UL49 500 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 RAI2Q9Y5P3 530 aa8.71□□□□□ -1.01
TPM3-213ENST00000368545 MYOFQ9NZM1 2061 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 A0A1W2PPM1 405 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 TRIM49D1C9J1S8 452 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 NEDD8-MDP1E9PL57 170 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 TYROBPO43914 113 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 CD160O95971 181 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 VSIG8P0DPA2 414 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 ERVK-10P10266 1014 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 CREB1P16220 341 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 FPR2P25090 351 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 PEX2P28328 305 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 NMBRP28336 390 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.02
TPM3-213ENST00000368545 CHRNA4P43681 627 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 SULT2A1Q06520 285 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 ILF2Q12905 390 aaKnown RBP8.71□□□□□ -1.02
TPM3-213ENST00000368545 DMC1Q14565 340 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 UGP2Q16851 508 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 SIRPB2Q5JXA9 342 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 CES3Q6UWW8 571 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 TMC5Q6UXY8 1006 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 KDELC2Q7Z4H8 507 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 CXorf67Q86X51 503 aaPredicted RBP8.71□□□□□ -1.02
TPM3-213ENST00000368545 C4orf33Q8N1A6 199 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 MDM1Q8TC05 714 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 CALML6Q8TD86 181 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 ACMSDQ8TDX5 336 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 ING5Q8WYH8 240 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 IRF7Q92985 503 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 APOPT1Q96IL0 206 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 TRIB3Q96RU7 358 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 FAM167BQ9BTA0 163 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 BBS2Q9BXC9 721 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 SLC2A11Q9BYW1 496 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 WDR12Q9GZL7 423 aaKnown RBP8.71□□□□□ -1.02
TPM3-213ENST00000368545 NOD2Q9HC29 1040 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 LHX3Q9UBR4 397 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 RIMKLBQ9ULI2 386 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 ACTL7AQ9Y615 435 aa8.71□□□□□ -1.02
TPM3-213ENST00000368545 MROH6A6NGR9 719 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 J3QKU1 62 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 TIMM44O43615 452 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 CYP17A1P05093 508 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 HADHAP40939 763 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 RGRP47804 291 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 CXCL12P48061 93 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 CSNK1DP48730 415 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 PRIM2P49643 509 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 IL9RQ01113 521 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 SLC18A2Q05940 514 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 MSLNQ13421 630 aaPredicted RBP8.7□□□□□ -1.02
TPM3-213ENST00000368545 SLC9A5Q14940 896 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 LAPTM4AQ15012 233 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 PGS1Q32NB8 556 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 HSF5Q4G112 596 aaPredicted RBP8.7□□□□□ -1.02
TPM3-213ENST00000368545 PITRM1Q5JRX3 1037 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 TSTD2Q5T7W7 516 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 TEDDM1Q5T9Z0 273 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 TTC19Q6DKK2 380 aaPredicted RBP8.7□□□□□ -1.02
TPM3-213ENST00000368545 LVRNQ6Q4G3 990 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 LINGO4Q6UY18 593 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 LMNTD2Q8IXW0 634 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 UNC5BQ8IZJ1 945 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 APCDD1Q8J025 514 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 SPEM1Q8N4L4 309 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 BANPQ8N9N5 519 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 ITFG1Q8TB96 612 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 PIWIL2Q8TC59 973 aaKnown RBP8.7□□□□□ -1.02
TPM3-213ENST00000368545 DLG3Q92796 817 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 LMLNQ96KR4 655 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 ZSWIM3Q96MP5 696 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 RBBP8Q99708 897 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 IQCGQ9H095 443 aaKnown RBP8.7□□□□□ -1.02
TPM3-213ENST00000368545 GDE1Q9NZC3 331 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms