RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 C15orf39Q6ZRI6 1047 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 CHPFQ8IZ52 775 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ZBTB2Q8N680 514 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ASCC1Q8N9N2 400 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 MAGEL2Q9UJ55 1249 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ZNF490Q9ULM2 529 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 FCF1Q9Y324 198 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 A0A1W2PQ67 120 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 C9IYK1 514 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 UBXN8O00124 270 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 EPORP19235 508 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 GJA9P57773 515 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 VBP1P61758 197 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ZSWIM7Q19AV6 140 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 PQLC3Q8N755 202 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ENDOVQ8N8Q3 282 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 EBF4Q9BQW3 602 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 A0A088AWK7 358 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 GABRDO14764 452 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 HAT1O14929 419 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 TIPRLO75663 272 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 CDK14O94921 469 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ESR1P03372 595 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 PRKAR1AP10644 381 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ZNF10P21506 573 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ITPKAP23677 461 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 ECT2LQ008S8 904 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 KLF1Q13351 362 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 PRKD1Q15139 912 aaPredicted RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 TSNQ15631 228 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 PROSER1Q86XN7 944 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 PHC2Q8IXK0 858 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 RAVER1Q8IY67 606 aaKnown RBP13.12□□□□□ -0.31
PTPRK-204ENST00000368210 LPGAT1Q92604 370 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 FEM1CQ96JP0 617 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 SMOQ99835 787 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 C16orf70Q9BSU1 422 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 LRTM1Q9HBL6 345 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 CCNB1IP1Q9NPC3 277 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 NUDT4Q9NZJ9 180 aa13.12□□□□□ -0.31
PTPRK-204ENST00000368210 CLTBP09497 229 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 HSPA7P48741 367 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 POLR2JP52435 117 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 MLLT6P55198 1093 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 TMEM214Q6NUQ4 689 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 FGD2Q7Z6J4 655 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 ZC3H7AQ8IWR0 971 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 TBC1D21Q8IYX1 336 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 CLHC1Q8NHS4 586 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 APOLD1Q96LR9 279 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 CORO2BQ9UQ03 480 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 APOL3O95236 402 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 FGF19O95750 216 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 MAGEA10P43363 369 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 MAPK12P53778 367 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 SLC10A7Q0GE19 358 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 PEX6Q13608 980 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 PAFAH1B3Q15102 231 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 FBXL22Q6P050 247 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 CPNE9Q8IYJ1 553 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 ASB12Q8WXK4 309 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 POP5Q969H6 163 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 DHRS1Q96LJ7 313 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 TNNI3P19429 210 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 PTGER3P43115 390 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 FAIM2Q9BWQ8 316 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 UNC93B1Q9H1C4 597 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 COL2A1P02458 1487 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 H7C0S8 307 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 PIRO00625 290 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 CCL16O15467 120 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 MAGP20916 626 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 RPIAP49247 311 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 R3HCC1LQ7Z5L2 792 aaKnown RBP13.11□□□□□ -0.31
PTPRK-204ENST00000368210 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 USP7Q93009 1102 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 NACC2Q96BF6 587 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
PTPRK-204ENST00000368210 ZNF624Q9P2J8 865 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms