RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TNFSF15O95150 251 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 PRSS56P0CW18 603 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 NSG1P42857 185 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 PRLHRP49683 370 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 SESN2P58004 480 aaPredicted RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 CFHR1Q03591 330 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 CCDC173Q0VFZ6 552 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 GPS1Q13098 491 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 NFE2L1Q14494 772 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 ITIH4Q14624 930 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 SEPT7Q16181 437 aaKnown RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 MAP9Q49MG5 647 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 PHF19Q5T6S3 580 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 LYPLAL1Q5VWZ2 237 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 WDR74Q6RFH5 385 aaPredicted RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 CERS6Q6ZMG9 384 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 FAM83HQ6ZRV2 1179 aaPredicted RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 TMEM26Q6ZUK4 368 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 ZNF761Q86XN6 746 aaPredicted RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 TRIM48Q8IWZ4 208 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 PIANPQ8IYJ0 282 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 CFAP206Q8IYR0 622 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 CLDN19Q8N6F1 224 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 PPHLN1Q8NEY8 458 aaKnown RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 OR6P1Q8NGX9 317 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 SNIP1Q8TAD8 396 aaKnown RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 ZFPM2Q8WW38 1151 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 NCSTNQ92542 709 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 CXorf40BQ96DE9 158 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 INSM2Q96T92 566 aaPredicted RBP9.66□□□□□ -0.86
CD48-202ENST00000368046 NUDT22Q9BRQ3 303 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 CCM2Q9BSQ5 444 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 ASCL3Q9NQ33 180 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 THSD1Q9NS62 852 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 SMARCAL1Q9NZC9 954 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 SLC2A6Q9UGQ3 507 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 ANAPC5Q9UJX4 755 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 PSMD13Q9UNM6 376 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 NEU2Q9Y3R4 380 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 SAR1BQ9Y6B6 198 aa9.66□□□□□ -0.86
CD48-202ENST00000368046 A0A087WV48 116 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 GOLGA6L10A0A0M3HER8 536 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 TCRBV7S3A2A0A539 114 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 OR51F1A6NGY5 319 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 LILRA5A6NI73 299 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 HGSO14964 777 aaPredicted RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 RRP8O43159 456 aaKnown RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 DUX1O43812 170 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 PHF2O75151 1096 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 GOT2P00505 430 aaKnown RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 POLBP06746 335 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 ITGA2BP08514 1039 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 GSTM1P09488 218 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 JMJD7P0C870 316 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 MLNP12872 115 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 AMD1P17707 334 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 FOXN2P32314 431 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 MAGEA6P43360 314 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 FNTAP49354 379 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 PPM1FP49593 454 aaPredicted RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 PRSS12P56730 875 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 PRAMEP78395 509 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 GSTM4Q03013 218 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 RPE65Q16518 533 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 DBN1Q16643 649 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 FASTKD1Q53R41 847 aaKnown RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 ARMC3Q5W041 872 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 CAPRIN2Q6IMN6 1127 aaKnown RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 ZNF449Q6P9G9 518 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 LRRC69Q6ZNQ3 347 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 ARHGAP22Q7Z5H3 698 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 PLXDC1Q8IUK5 500 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 ZNF248Q8NDW4 579 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 NAT14Q8WUY8 206 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.65□□□□□ -0.86
CD48-202ENST00000368046 NAPGQ99747 312 aaPredicted RBP9.65□□□□□ -0.86
CD48-202ENST00000368046 KIFC1Q9BW19 673 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 TBC1D10AQ9BXI6 508 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 VPS37BQ9H9H4 285 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 KCND1Q9NSA2 647 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 LOXL2Q9Y4K0 774 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 PCDHGA7Q9Y5G6 932 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 KNTC1P50748 2209 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 ASXL3Q9C0F0 2248 aa9.65□□□□□ -0.86
CD48-202ENST00000368046 EPG5Q9HCE0 2579 aa9.65□□□□□ -0.87
CD48-202ENST00000368046 PRAMEF33A0A0G2JMD5 474 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 CTAGE9A4FU28 777 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 CDRT15L2A8MXV6 281 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 F8W8V4 182 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 NVLO15381 856 aaKnown RBP9.64□□□□□ -0.87
CD48-202ENST00000368046 UBXN7O94888 489 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 OR56A5P0C7T3 313 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 THRAP10827 490 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 HGFP14210 728 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 MPSTP25325 297 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 MGAT1P26572 445 aa9.64□□□□□ -0.87
CD48-202ENST00000368046 PBLDP30039 288 aaPredicted RBP9.64□□□□□ -0.87
CD48-202ENST00000368046 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
CD48-202ENST00000368046 VPS41P49754 854 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms