RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 LYSMD4Q5XG99 296 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 C18orf63Q68DL7 685 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 RINT1Q6NUQ1 792 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 METTL2BQ6P1Q9 378 aaKnown RBP-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 FASTKD5Q7L8L6 764 aaKnown RBP-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 NOXA1Q86UR1 476 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 GHDCQ8N2G8 530 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 SPATA6LQ8N4H0 392 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 MARVELD2Q8N4S9 558 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 GBGT1Q8N5D6 347 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 OR2L5Q8NG80 312 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 GDPD5Q8WTR4 605 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 SLCO4A1Q96BD0 722 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 ERLEC1Q96DZ1 483 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 GRAMD2BQ96HH9 432 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 METTL2AQ96IZ6 378 aaKnown RBP-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 STRBPQ96SI9 672 aaKnown RBP-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 NUP88Q99567 741 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 MAP3K3Q99759 626 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 MAK16Q9BXY0 300 aaKnown RBP-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 PITPNM3Q9BZ71 974 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 LRRC27Q9C0I9 530 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 CLPBQ9H078 707 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 NDST4Q9H3R1 872 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 VNN3Q9NY84 501 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 FBXL2Q9UKC9 423 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 DTNAQ9Y4J8 743 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 CSNK1G3Q9Y6M4 447 aa-0.35□□□□□ -2.47
RNU6-340P-201ENST00000364005 IGLV4-60A0A075B6I1 120 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 A0A0U1RQS6 177 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ZNF233A6NK53 670 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ANKRD63C9JTQ0 380 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 SPINT2O43291 252 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 KATNA1O75449 491 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 WISP2O76076 250 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 NDST3O95803 873 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 RENP00797 406 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 IGHEP01854 428 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ZCCHC18P0CG32 403 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 UMPSP11172 480 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 PCNAP12004 261 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 MYL4P12829 197 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ETFAP13804 333 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 UGT1A1P22309 533 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 KLRK1P26718 216 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 AKT1P31749 480 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 PRELPP51888 382 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CLDN20P56880 219 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 STX17P56962 302 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 KRTAP12-1P59990 96 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CSNK2A1P68400 391 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CSTF1Q05048 431 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 LGALS3BPQ08380 585 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 BYSLQ13895 437 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ISXQ2M1V0 245 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 C2orf68Q2NKX9 166 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 MS4A18Q3C1V0 323 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 TIMM50Q3ZCQ8 353 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 KRTAP13-2Q52LG2 175 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 NDUFAF5Q5TEU4 345 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 OVCH2Q7RTZ1 564 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 TBC1D26Q86UD7 250 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 HIPK1Q86Z02 1210 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 KIAA0319LQ8IZA0 1049 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 BEST3Q8N1M1 668 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 NIPA2Q8N8Q9 360 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 DNAAF1Q8NEP3 725 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CSNK2A3Q8NEV1 391 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 OR6S1Q8NH40 331 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 VANGL1Q8TAA9 524 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ZNF564Q8TBZ8 553 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 HMGB4Q8WW32 186 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 HSD17B8Q92506 261 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 NSMAFQ92636 917 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 MAGEB18Q96M61 343 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 TWNKQ96RR1 684 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 EIF2AK1Q9BQI3 630 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 MXRA8Q9BRK3 442 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 C16orf70Q9BSU1 422 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 STRA6Q9BX79 667 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 DEFB126Q9BYW3 111 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 DDX24Q9GZR7 859 aaKnown RBP eCLIP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 SEPSECSQ9HD40 501 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 GPR108Q9NPR9 543 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 B3GAT2Q9NPZ5 323 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 LIN7CQ9NUP9 197 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 SLC52A1Q9NWF4 448 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 ZNF223Q9UK11 482 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 FBXO9Q9UK97 447 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CA14Q9ULX7 337 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 L1RE1Q9UN81 338 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 RCE1Q9Y256 329 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CNPY2Q9Y2B0 182 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 LUC7L2Q9Y383 392 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CHTOPQ9Y3Y2 248 aaKnown RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 WIF1Q9Y5W5 379 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 CAPN7Q9Y6W3 813 aa-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 COL11A1P12107 1806 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-340P-201ENST00000364005 GPR179Q6PRD1 2367 aa-0.37□□□□□ -2.47
RNU6-340P-201ENST00000364005 ASTN1O14525 1302 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms