RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CCDC90BQ9GZT6 254 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 CCDC68Q9H2F9 335 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 TRNAU1APQ9NX07 287 aaKnown RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 MARCH2Q9P0N8 246 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 VPS4AQ9UN37 437 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 COMMD10Q9Y6G5 202 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 TLR5O60602 858 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 GSNP06396 782 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 GPIP06744 558 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 CYP4B1P13584 511 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 SLC6A4P31645 630 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 IL1RL1Q01638 556 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 NR1D2Q14995 579 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 ABRAXAS2Q15018 415 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 NR6A1Q15406 480 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 MBOAT1Q6ZNC8 495 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 GALNT5Q7Z7M9 940 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 THEM5Q8N1Q8 247 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 OR6K2Q8NGY2 324 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 BARD1Q99728 777 aaKnown RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 C17orf80Q9BSJ5 609 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 TRIM54Q9BYV2 358 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 TAS2R13Q9NYV9 303 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 GIT1Q9Y2X7 761 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 UPK3BL1B0FP48 263 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 UPK3BL2E5RIL1 263 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 E2F3O00716 465 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 MITFO75030 526 aaPredicted RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 DUSP11O75319 330 aaKnown RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 EEDO75530 441 aaKnown RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 INMTO95050 263 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 PRSS23O95084 383 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 INHBBP09529 407 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 HMOX2P30519 316 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 HUNKP57058 714 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 CBX3Q13185 183 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 DPY19L1Q2PZI1 675 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 SPESP1Q6UW49 350 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 DCDC5Q6ZRR9 648 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 USP51Q70EK9 711 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 C16orf59Q7L2K0 433 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 FAM126BQ8IXS8 530 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 METTL6Q8TCB7 284 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 BRSK1Q8TDC3 778 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.44□□□□□ -0.743e-9■■■■■ 78.5
SMC3-201ENST00000361804 SEPT5Q99719 369 aaPredicted RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 TFB2MQ9H5Q4 396 aaKnown RBP10.44□□□□□ -0.74
SMC3-201ENST00000361804 EPS8L2Q9H6S3 715 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 RNF186Q9NXI6 227 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 PKD2L2Q9NZM6 624 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 SUN2Q9UH99 717 aa10.44□□□□□ -0.74
SMC3-201ENST00000361804 ESRRBO95718 433 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 OCM2P0CE71 109 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 OCMP0CE72 109 aaPredicted RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 RPL9P32969 192 aaKnown RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 KPNA1P52294 538 aaPredicted RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 PLA2G16P53816 162 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 RAD51Q06609 339 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 ATP6AP1LQ52LC2 224 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 XKR7Q5GH72 579 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 PRMT9Q6P2P2 845 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 GPRIN3Q6ZVF9 776 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 TAS2R42Q7RTR8 314 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 PACRGLQ8N7B6 248 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 ITFG1Q8TB96 612 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 FBXO32Q969P5 355 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 ALOXE3Q9BYJ1 711 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 INTS10Q9NVR2 710 aaKnown RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 PAK1IP1Q9NWT1 392 aaPredicted RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 LIMD1Q9UGP4 676 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 PCDHB3Q9Y5E6 796 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 TRIM64A6NGJ6 449 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 NT5C1B-RDH14C9J2C7 533 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 PRR35P0CG20 571 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 MC4RP32245 332 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 RPL38P63173 70 aaKnown RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 TUSC3Q13454 348 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 CCNYL2Q5T2Q4 361 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 LAIR2Q6ISS4 152 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 ANKRD46Q86W74 232 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 ALDH16A1Q8IZ83 802 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 CLDN19Q8N6F1 224 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 TEX26Q8N6G2 289 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 KLHL23Q8NBE8 558 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 OR13F1Q8NGS4 319 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 CNIH3Q8TBE1 160 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 THUMPD3Q9BV44 507 aaKnown RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 TBC1D23Q9NUY8 699 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 LEF1Q9UJU2 399 aaPredicted RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 COQ6Q9Y2Z9 468 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 DIRAS1O95057 198 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 ALPLP05186 524 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 CTPS1P17812 591 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 CCNA2P20248 432 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 IDUAP35475 653 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 HLCSP50747 726 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 TPD52P55327 224 aaPredicted RBP10.43□□□□□ -0.74
SMC3-201ENST00000361804 PRKCZQ05513 592 aa10.43□□□□□ -0.74
SMC3-201ENST00000361804 UTS2BQ765I0 119 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms