RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PTPN3P26045 913 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 PBLDP30039 288 aaPredicted RBP20.62■□□□□ 0.89
CD47-202ENST00000361309 SPAM1P38567 509 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 DYNLT1P63172 113 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TUBB4BP68371 445 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 GPS2Q13227 327 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TUBB2AQ13885 445 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 GPR19Q15760 415 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 LDLRAP1Q5SW96 308 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TMEM220Q6QAJ8 160 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 FAM151BQ6UXP7 276 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 VSIG1Q86XK7 387 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 RFX6Q8HWS3 928 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TMEM126BQ8IUX1 230 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 SSC4DQ8WTU2 575 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 IQCDQ96DY2 449 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TEKT5Q96M29 485 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TUBB2BQ9BVA1 445 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 TRABDQ9H4I3 376 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 HRASLS2Q9NWW9 162 aa20.62■□□□□ 0.89
CD47-202ENST00000361309 SEMA7AO75326 666 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 SORBS2O94875 1100 aaKnown RBP20.61■□□□□ 0.89
CD47-202ENST00000361309 MTHFD1P11586 935 aaKnown RBP20.61■□□□□ 0.89
CD47-202ENST00000361309 PTGIRP43119 386 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 PPP2R5EQ16537 467 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 SLC18A3Q16572 532 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 SIRPB2Q5JXA9 342 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 ZDHHC20Q5W0Z9 365 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 PAPD7Q5XG87 772 aaKnown RBP20.61■□□□□ 0.89
CD47-202ENST00000361309 SLC38A9Q8NBW4 561 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 DDHD1Q8NEL9 900 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 DTX3LQ8TDB6 740 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 RNF25Q96BH1 459 aaPredicted RBP20.61■□□□□ 0.89
CD47-202ENST00000361309 ZNF501Q96CX3 271 aaPredicted RBP20.61■□□□□ 0.89
CD47-202ENST00000361309 KCND1Q9NSA2 647 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 IL17CQ9P0M4 197 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 FAM153AQ9UHL3 310 aa20.61■□□□□ 0.89
CD47-202ENST00000361309 DNMT3AQ9Y6K1 912 aaPredicted RBP20.61■□□□□ 0.89
CD47-202ENST00000361309 LOC285095A0A1B0GVY8 99 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 KRT1P04264 644 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 LPOP22079 712 aaPredicted RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 CD68P34810 354 aaPredicted RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 ANP32AP39687 249 aaKnown RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 CHRNA4P43681 627 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 WNT3AP56704 352 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 XRCC4Q13426 336 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 GPRC6AQ5T6X5 926 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 IZUMO3Q5VZ72 239 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 METRNLQ641Q3 311 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 CAVIN1Q6NZI2 390 aaKnown RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 DUS1LQ6P1R4 473 aaKnown RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 KDELC1Q6UW63 502 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 ZNF517Q6ZMY9 492 aaPredicted RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 LUZP1Q86V48 1076 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 OOSP2Q86WS3 158 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 SLC25A41Q8N5S1 370 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 INSM2Q96T92 566 aaPredicted RBP20.6■□□□□ 0.89
CD47-202ENST00000361309 WWP1Q9H0M0 922 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 CHST8Q9H2A9 424 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.6■□□□□ 0.89
CD47-202ENST00000361309 CRYBG3Q68DQ2 2970 aa20.6■□□□□ 0.89
CD47-202ENST00000361309 CREBBPQ92793 2442 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 GLYATL1P3A0A0U1RQE8 302 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 OR6C74A6NCV1 312 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 BUD23O43709 281 aaKnown RBP20.59■□□□□ 0.89
CD47-202ENST00000361309 ZBTB11O95625 1053 aaPredicted RBP20.59■□□□□ 0.89
CD47-202ENST00000361309 TMEM253P0C7T8 217 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 RNF224P0DH78 156 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 TPM4P67936 248 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 PRKD1Q15139 912 aaPredicted RBP20.59■□□□□ 0.89
CD47-202ENST00000361309 TMTC4Q5T4D3 741 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 PRAMEF17Q5VTA0 474 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 LCN10Q6JVE6 187 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 ARMC6Q6NXE6 501 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 FBXO38Q6PIJ6 1188 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 GLT6D1Q7Z4J2 308 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 BEND7Q8N7W2 519 aaPredicted RBP20.59■□□□□ 0.89
CD47-202ENST00000361309 OR8K5Q8NH50 307 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 SLC35G2Q8TBE7 412 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 BLOC1S5Q8TDH9 187 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 ADAMTS17Q8TE56 1095 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 C12orf66Q96MD2 445 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 PPM1MQ96MI6 270 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 SAE1Q9UBE0 346 aaPredicted RBP20.59■□□□□ 0.89
CD47-202ENST00000361309 ZNF451Q9Y4E5 1061 aa20.59■□□□□ 0.89
CD47-202ENST00000361309 F5H423 210 aaPredicted RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 GAPDHSO14556 408 aaPredicted RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 KLK3P07288 261 aaPredicted RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 NFKB1P19838 968 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 ARCN1P48444 511 aaKnown RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 KPNA2P52292 529 aaKnown RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 ITGA9Q13797 1035 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 INPP5JQ15735 1006 aaPredicted RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 PRR30Q53SZ7 412 aaPredicted RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 ODF2Q5BJF6 829 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 PLEKHS1Q5SXH7 462 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 FNBP1LQ5T0N5 605 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 DET1Q7L5Y6 550 aa20.58■□□□□ 0.89
CD47-202ENST00000361309 ENDOVQ8N8Q3 282 aaKnown RBP20.58■□□□□ 0.89
CD47-202ENST00000361309 LATS2Q9NRM7 1088 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms