RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SEMA6AQ9H2E6 1030 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 IL23AQ9NPF7 189 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 RNF11Q9Y3C5 154 aa22.29■■□□□ 1.16
LDB1-201ENST00000361198 HELZP42694 1942 aaKnown RBP22.29■■□□□ 1.16
LDB1-201ENST00000361198 ZNF106Q9H2Y7 1883 aaKnown RBP22.29■■□□□ 1.16
LDB1-201ENST00000361198 NR1H2P55055 460 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 NRF1Q16656 503 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 MYLK3Q32MK0 819 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 C18orf21Q32NC0 220 aaPredicted RBP22.28■■□□□ 1.16
LDB1-201ENST00000361198 ISLR2Q6UXK2 745 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 RETREG3Q86VR2 466 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 ZFP28Q8NHY6 868 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 PBXIP1Q96AQ6 731 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 C19orf43Q9BQ61 176 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 GRIP2Q9C0E4 1043 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 GNPTGQ9UJJ9 305 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 TMCO1Q9UM00 188 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 HS3ST2Q9Y278 367 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 GOLGA8CPA6NN73 597 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 RFPL2O75678 378 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 SLC25A14O95258 325 aaPredicted RBP22.28■■□□□ 1.16
LDB1-201ENST00000361198 UROSP10746 265 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 ATP6V1B1P15313 513 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 SLC7A2P52569 658 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 C22orf39Q6P5X5 142 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 CRTC1Q6UUV9 634 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 SCIMPQ6UWF3 145 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 FRA10AC1Q70Z53 315 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 DHFR2Q86XF0 187 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 MIER2Q8N344 545 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 OR52B6Q8NGF0 335 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 ACOX2Q99424 681 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 ARMC1Q9NVT9 282 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 NUDT4Q9NZJ9 180 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 CRLS1Q9UJA2 301 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 DMTF1Q9Y222 760 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 CHD7Q9P2D1 2997 aa22.28■■□□□ 1.16
LDB1-201ENST00000361198 C9JVG2 144 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 NR5A2O00482 541 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 OR4F21O95013 312 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 TRIM16O95361 564 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 HSPA8P11142 646 aaKnown RBP22.27■■□□□ 1.16
LDB1-201ENST00000361198 SPAM1P38567 509 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 DIO3P55073 304 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.27■■□□□ 1.162e-7■□□□□ 8.7
LDB1-201ENST00000361198 PLPP4Q5VZY2 271 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 HMBOX1Q6NT76 420 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 B3GNT6Q6ZMB0 384 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 ADAMTSL2Q86TH1 951 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 CARM1Q86X55 608 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 GPR26Q8NDV2 337 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 CDK15Q96Q40 435 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 LYSMD1Q96S90 227 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 SLC39A3Q9BRY0 314 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 NUSAP1Q9BXS6 441 aaKnown RBP22.27■■□□□ 1.16
LDB1-201ENST00000361198 SDR39U1Q9NRG7 319 aaPredicted RBP22.27■■□□□ 1.16
LDB1-201ENST00000361198 ABCD2Q9UBJ2 740 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 SNX13Q9Y5W8 968 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 MTCL1Q9Y4B5 1905 aaKnown RBP22.27■■□□□ 1.16
LDB1-201ENST00000361198 PRR35P0CG20 571 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 CYP2R1Q6VVX0 501 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 GPRIN3Q6ZVF9 776 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 ZUFSPQ96AP4 578 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 HOPXQ9BPY8 73 aaPredicted RBP22.27■■□□□ 1.16
LDB1-201ENST00000361198 EMILIN2Q9BXX0 1053 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 CXXC1Q9P0U4 656 aaPredicted RBP22.27■■□□□ 1.16
LDB1-201ENST00000361198 MAP10Q9P2G4 905 aa22.27■■□□□ 1.16
LDB1-201ENST00000361198 MYOCOSA0A1B0GUC4 107 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 GIPC1O14908 333 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 VPS4BO75351 444 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 PFKLP17858 780 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 CAPN3P20807 821 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 TEAD2Q15562 447 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 VPS26BQ4G0F5 336 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 XKR7Q5GH72 579 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 MTX3Q5HYI7 312 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 GRAMD4Q6IC98 578 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 CBARPQ8N350 705 aaPredicted RBP22.26■■□□□ 1.15
LDB1-201ENST00000361198 ANKFN1Q8N957 763 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 ECHDC3Q96DC8 303 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 DTNBP1Q96EV8 351 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 SCRN2Q96FV2 425 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 SLC45A3Q96JT2 553 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 SLC29A1Q99808 456 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 SUV39H2Q9H5I1 410 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 ETAA1Q9NY74 926 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 SLCO3A1Q9UIG8 710 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 INSL6Q9Y581 213 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 IRAK3Q9Y616 596 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 AK5Q9Y6K8 562 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 A0A1B0GVG6 124 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 NEDD8-MDP1E9PL57 170 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 MOSPD3O75425 235 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 BMP2P12643 396 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 ERVPABLB-1P60509 514 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 LRRC66Q68CR7 880 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 OGFOD2Q6N063 350 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 TPRG1Q6ZUI0 275 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 CDYL2Q8N8U2 506 aa22.26■■□□□ 1.15
LDB1-201ENST00000361198 OR2T34Q8NGX1 318 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms