RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PAQR3Q6TCH7 311 aa12.26□□□□□ -0.45
UBA3-202ENST00000361055 C12orf43Q96C57 262 aaKnown RBP12.26□□□□□ -0.45
UBA3-202ENST00000361055 CNDP2Q96KP4 475 aaKnown RBP12.26□□□□□ -0.45
UBA3-202ENST00000361055 KCTD14Q9BQ13 255 aaPredicted RBP12.26□□□□□ -0.45
UBA3-202ENST00000361055 CXorf21Q9HAI6 301 aa12.26□□□□□ -0.45
UBA3-202ENST00000361055 NLE1Q9NVX2 485 aaPredicted RBP12.26□□□□□ -0.45
UBA3-202ENST00000361055 SMPD3Q9NY59 655 aaPredicted RBP12.26□□□□□ -0.45
UBA3-202ENST00000361055 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
UBA3-202ENST00000361055 BTRCQ9Y297 605 aa12.26□□□□□ -0.45
UBA3-202ENST00000361055 TMEM265A0A087WTH1 108 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 ZNF840PA6NDX5 716 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 GRXCR2A6NFK2 248 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 CCL16O15467 120 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 RHOBTB1O94844 696 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 ESRRBO95718 433 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 NDST3O95803 873 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 CHEK2O96017 543 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 LDLRP01130 860 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 PSMA3P25788 255 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 MAPKAPK2P49137 400 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 CYBRD1Q53TN4 286 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 XKR7Q5GH72 579 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 KLHL35Q6PF15 583 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 PRR23BQ6ZRT6 265 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 USP51Q70EK9 711 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 OR13C4Q8NGS5 318 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 DNAJB14Q8TBM8 379 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 CYGBQ8WWM9 190 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 MUC3BQ9H195 1237 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 ZNF334Q9HCZ1 680 aaPredicted RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 ZIM2Q9NZV7 527 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 DOCK6Q96HP0 2047 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 SH3PXD2BA1X283 911 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 ASPDHA6ND91 283 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 TRIM64BA6NI03 449 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 CCDC154A6NI56 674 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 H0YAE9 185 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 TPST1O60507 370 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 TLR5O60602 858 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 ECI2O75521 394 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 RFPL2O75678 378 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 F11P03951 625 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 SERPINF2P08697 491 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 CHRM3P20309 590 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 RPL10P27635 214 aaKnown RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 DCKP27707 260 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 RPS9P46781 194 aaKnown RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 GALK1P51570 392 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 POLR2JP52435 117 aaKnown RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 EMX2Q04743 252 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 PAGE3Q5JUK9 113 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 ALG1LQ6GMV1 187 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 LYSMD3Q7Z3D4 306 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 TMC8Q8IU68 726 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 PNPT1Q8TCS8 783 aaKnown RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 OSCP1Q8WVF1 389 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 BIRC7Q96CA5 298 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 TUBA1CQ9BQE3 449 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 LRRC3Q9BY71 257 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 SEMA4BQ9NPR2 832 aaPredicted RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 IRAK4Q9NWZ3 460 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 PKD2L2Q9NZM6 624 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 EBF1Q9UH73 591 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 FAF1Q9UNN5 650 aaPredicted RBP12.25□□□□□ -0.45
UBA3-202ENST00000361055 MED16Q9Y2X0 877 aa12.25□□□□□ -0.45
UBA3-202ENST00000361055 A0A1B0GTL3 188 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 FAM234BA2RU67 622 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 C9JVG2 144 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 EI24O14681 340 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 MUSKO15146 869 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 SNX2O60749 519 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 XYLBO75191 536 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 POU2F2P09086 479 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 MTHFD1P11586 935 aaKnown RBP12.24□□□□□ -0.45
UBA3-202ENST00000361055 CD9P21926 228 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 FMO4P31512 558 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 ERVK-8P63133 956 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 ADARB1P78563 741 aaKnown RBP12.24□□□□□ -0.45
UBA3-202ENST00000361055 ECT2LQ008S8 904 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 EFEMP1Q12805 493 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 GRSF1Q12849 480 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBA3-202ENST00000361055 KCNC3Q14003 757 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 ZNF235Q14590 738 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 RABL3Q5HYI8 236 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 C10orf120Q5SQS8 335 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 HECTD3Q5T447 861 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 RAP1GAP2Q684P5 730 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 NANOGP8Q6NSW7 305 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 TMEM150AQ86TG1 271 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 SYVN1Q86TM6 617 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 HID1Q8IV36 788 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 FUBP1Q96AE4 644 aaKnown RBP12.24□□□□□ -0.45
UBA3-202ENST00000361055 VPS33AQ96AX1 596 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 TEX37Q96LM6 180 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 TRIB3Q96RU7 358 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 BDH2Q9BUT1 245 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 CCDC68Q9H2F9 335 aa12.24□□□□□ -0.45
UBA3-202ENST00000361055 NSUN3Q9H649 340 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms