RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 PRRX2Q99811 253 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 LRFN3Q9BTN0 628 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 CCDC28BQ9BUN5 200 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 MYLK2Q9H1R3 596 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 ZNF395Q9H8N7 513 aaPredicted RBP13.29□□□□□ -0.28
CCDC197-201ENST00000359253 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
CCDC197-201ENST00000359253 PFDN4Q9NQP4 134 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 PNPOQ9NVS9 261 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 CD84Q9UIB8 345 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 TMPRSS11EQ9UL52 423 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 SLC12A4Q9UP95 1085 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 TRIM33Q9UPN9 1127 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 OARD1Q9Y530 152 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 TRIOO75962 3097 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 PLXNA2O75051 1894 aa13.29□□□□□ -0.28
CCDC197-201ENST00000359253 GOLGA8QA0A0J9YX86 632 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 GOLGA8OA6NCC3 632 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 NEMP2A6NFY4 417 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 IQCF5A8MTL0 148 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 GOLGA8NF8WBI6 632 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 CDC7O00311 574 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 SPINT1O43278 529 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 VEGFDO43915 354 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 ATG13O75143 517 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 TM7SF2O76062 418 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 SUPT7LO94864 414 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 GM2AP17900 193 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 AVPR2P30518 371 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 ARRB2P32121 409 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 CA5AP35218 305 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 TIE1P35590 1138 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 GPR1P46091 355 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 SOX9P48436 509 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 IRX1P78414 480 aaPredicted RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 CDKL1Q00532 357 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 SF3A3Q12874 501 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 TMEM115Q12893 351 aaPredicted RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 CDC16Q13042 620 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 FZD5Q13467 585 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 LRRC32Q14392 662 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 TGFBIQ15582 683 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 PFKFB4Q16877 469 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 POM121L1PQ3SYA9 428 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 UNC50Q53HI1 259 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 EOGTQ5NDL2 527 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 NEK5Q6P3R8 708 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 CYHR1Q6ZMK1 362 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 ACAD11Q709F0 780 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 EFL1Q7Z2Z2 1120 aaKnown RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 CLNKQ7Z7G1 428 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 MTDHQ86UE4 582 aaKnown RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 KBTBD6Q86V97 674 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 TCAIMQ8N3R3 496 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 PDPRQ8NCN5 879 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 FLCNQ8NFG4 579 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 PJA1Q8NG27 643 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 WRAP53Q9BUR4 548 aaKnown RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 TRIM54Q9BYV2 358 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 UNKQ9C0B0 810 aaKnown RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 KCNH6Q9H252 994 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 GSTO2Q9H4Y5 243 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 COG4Q9H9E3 785 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 MARCOQ9UEW3 520 aaPredicted RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 GPR34Q9UPC5 381 aa13.28□□□□□ -0.28
CCDC197-201ENST00000359253 RRP15Q9Y3B9 282 aaKnown RBP13.28□□□□□ -0.28
CCDC197-201ENST00000359253 F5P12259 2224 aa13.27□□□□□ -0.28
CCDC197-201ENST00000359253 C17orf113A0A1B0GUU1 675 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 PABPN1LA6NDY0 278 aaKnown RBP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 NPEPPSL1A6NEC2 478 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 GPR89AB7ZAQ6 455 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 UBXN8O00124 270 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 SLC22A2O15244 555 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 MID1O15344 667 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 MMP20O60882 483 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 UBOX5O94941 541 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 DNTTP04053 509 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CHRNGP07510 517 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 GPR89BP0CG08 455 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CHRNB1P11230 501 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 VCLP18206 1134 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 SERPINB3P29508 390 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 ADSLP30566 484 aaPredicted RBP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 DRD3P35462 400 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 PRLHRP49683 370 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 IDH3AP50213 366 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 RPS14P62263 151 aaKnown RBP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 GTF2H3Q13889 308 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 PCBP2Q15366 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC197-201ENST00000359253 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 BCL7AQ4VC05 210 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 ACSBG2Q5FVE4 666 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 SH2D4BQ5SQS7 431 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 SULT1C3Q6IMI6 304 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 KIAA1161Q6NSJ0 714 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 ADAMTSL4Q6UY14 1074 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 USP30Q70CQ3 517 aa13.27□□□□□ -0.29
CCDC197-201ENST00000359253 CUZD1Q86UP6 607 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms