RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SPASTQ9UBP0 616 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 COMMD3-BMI1R4GMX3 469 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 A0A087WXM4 84 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 A0A1W2PP18 115 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 OR2AG2A6NM03 316 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 TARM1B6A8C7 271 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 EI24O14681 340 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 HS6ST1O60243 411 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 CLIC3O95833 236 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 NTRK1P04629 796 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 ABCB1P08183 1280 aaPredicted RBP11.03□□□□□ -0.64
SSU72-202ENST00000359060 STK19P49842 368 aaPredicted RBP11.03□□□□□ -0.64
SSU72-202ENST00000359060 NAA20P61599 178 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 TNK2Q07912 1038 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 NADK2Q4G0N4 442 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 OR52E8Q6IFG1 317 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 SNX20Q7Z614 316 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 SYTL1Q8IYJ3 562 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 APCDD1Q8J025 514 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 GANCQ8TET4 914 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 APOLD1Q96LR9 279 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 ATOH8Q96SQ7 321 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 POPDC3Q9HBV1 291 aa11.03□□□□□ -0.64
SSU72-202ENST00000359060 IGLV3-10A0A075B6K4 115 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 FBP2O00757 339 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 ANXA6P08133 673 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 HTR6P50406 440 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 CCT8P50990 548 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 POLR2LP62875 67 aaKnown RBP11.02□□□□□ -0.64
SSU72-202ENST00000359060 BIRC2Q13490 618 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 GOLGA7Q7Z5G4 137 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 CENPNQ96H22 339 aaPredicted RBP11.02□□□□□ -0.64
SSU72-202ENST00000359060 LRCH3Q96II8 777 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 INSL5Q9Y5Q6 135 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 LOC285556D6RIA3 1793 aa11.02□□□□□ -0.64
SSU72-202ENST00000359060 PTGES3LE9PB15 166 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 NME4O00746 187 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 C8AP07357 584 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 CBLBQ13191 982 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 ACOX1Q15067 660 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 SYT12Q8IV01 421 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 TBC1D21Q8IYX1 336 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 LIX1Q8N485 282 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 SLC30A3Q99726 388 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 CHID1Q9BWS9 393 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 UGT2B28Q9BY64 529 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 CLK4Q9HAZ1 481 aaKnown RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 ADGRE2Q9UHX3 823 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 BRCA1P38398 1863 aaKnown RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 SMAD6O43541 496 aaKnown RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 PEX11BO96011 259 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 POLR2EP19388 210 aaKnown RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 FAM189BP81408 668 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 GALNT1Q10472 559 aaPredicted RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 TRIM71Q2Q1W2 868 aaKnown RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 CHSY3Q70JA7 882 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 LILRA2Q8N149 483 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 INTS7Q9NVH2 962 aaKnown RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 KCTD5Q9NXV2 234 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 A0A1W2PQ67 120 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 SLC28A1O00337 649 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 SOD2P04179 222 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 FESP07332 822 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 LAG3P18627 525 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 EFNA1P20827 205 aaPredicted RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 MAPK1P28482 360 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 ACSM2AQ08AH3 577 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 LRP8Q14114 963 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 AFMIDQ63HM1 303 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 ACSM2BQ68CK6 577 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 MBOAT1Q6ZNC8 495 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 HORMAD1Q86X24 394 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 ACDQ96AP0 544 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 PRICKLE1Q96MT3 831 aaPredicted RBP11.02□□□□□ -0.65
SSU72-202ENST00000359060 SLC22A12Q96S37 553 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 ADI1Q9BV57 179 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 POLR1BQ9H9Y6 1135 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 SNX6Q9UNH7 406 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 DHRS7Q9Y394 339 aa11.02□□□□□ -0.65
SSU72-202ENST00000359060 SIP14410 1827 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 FAM234BA2RU67 622 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 MGAT4DA6NG13 374 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 H3BNX3 289 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 STX16O14662 325 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 CST1P01037 141 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 ADH1AP07327 375 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 GSSP48637 474 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 PRKCQQ04759 706 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 GK3PQ14409 553 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 PTGR1Q14914 329 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 TRIM60Q495X7 471 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 PLPP4Q5VZY2 271 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 CCDC81Q6ZN84 652 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 CCDC149Q6ZUS6 474 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 RETREG3Q86VR2 466 aa11.01□□□□□ -0.65
SSU72-202ENST00000359060 GALNT15Q8N3T1 639 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms