RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SMYD1Q8NB12 490 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 CSGALNACT1Q8TDX6 532 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 ANKRD49Q8WVL7 239 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 TIFAQ96CG3 184 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 HERPUD2Q9BSE4 406 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
VCP-201ENST00000358901 AMBNQ9NP70 447 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 C1orf109Q9NX04 203 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 SEC14L3Q9UDX4 400 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 ISM1B1AKI9 464 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 RAP2AP10114 183 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 ASMTP46597 345 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 PTPN5P54829 565 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 COPZ1P61923 177 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 HMGCS1Q01581 520 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 SEMG2Q02383 582 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 MADCAM1Q13477 382 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 FUT10Q6P4F1 479 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 C17orf64Q86WR6 236 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 LRRC58Q96CX6 371 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 MYOCQ99972 504 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 SLITRK2Q9H156 845 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 XYLT2Q9H1B5 865 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 MAP4K5Q9Y4K4 846 aa13.56□□□□□ -0.24
VCP-201ENST00000358901 A0A0G2JLL6 359 aaPredicted RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 ENPP3O14638 875 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 FYNP06241 537 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 ADH1AP07327 375 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 RPS14P62263 151 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 KLHL12Q53G59 568 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 TIFABQ6ZNK6 161 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 PRRT2Q7Z6L0 340 aaPredicted RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 TEX47Q8TBZ9 253 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 FAM83DQ9H4H8 585 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 TESMINQ9Y4I5 508 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 N6AMT1Q9Y5N5 214 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 ABCC6O95255 1503 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 H3BSA7 217 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 ASLP04424 464 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 POU2F1P14859 743 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 RPL17P18621 184 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 INCA1Q0VD86 236 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 EIF2B5Q13144 721 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 KCNA10Q16322 511 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 ATXN7L2Q5T6C5 722 aaPredicted RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 CDCA2Q69YH5 1023 aaPredicted RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 PIM3Q86V86 326 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 NDOR1Q9UHB4 597 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 CD84Q9UIB8 345 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 MATN2O00339 956 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 IVDP26440 423 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 SPRED3Q2MJR0 410 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 SULT1C3Q6IMI6 304 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 C1QTNF7Q9BXJ2 289 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 WBP11Q9Y2W2 641 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 AIREO43918 545 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 CCNYL3P0C7X3 344 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 PRPS2P11908 318 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 CDH5P33151 784 aaPredicted RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 CCR10P46092 362 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 RHDQ02161 417 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 SLC9A5Q14940 896 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 NAPRTQ6XQN6 538 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 CHSY3Q70JA7 882 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 CDH24Q86UP0 819 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 TTC29Q8NA56 475 aaPredicted RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 FEM1CQ96JP0 617 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 OSBPL2Q9H1P3 480 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 INTS10Q9NVR2 710 aaKnown RBP13.55□□□□□ -0.24
VCP-201ENST00000358901 EURLQ9NYK6 297 aa13.55□□□□□ -0.24
VCP-201ENST00000358901 ANKRD12Q6UB98 2062 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 C1QTNF3-AMACRE9PGA6 284 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 J3KR12 359 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 PRKCGP05129 697 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 PSMA1P25786 263 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 BIKQ13323 160 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 FBXL22Q6P050 247 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 PLET1Q6UQ28 207 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 RNF44Q7L0R7 432 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 ANKRD23Q86SG2 305 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 FIBCD1Q8N539 461 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 RAB2BQ8WUD1 216 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 SLC7A6OSQ96CW6 309 aaPredicted RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 NPY6RQ99463 290 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 USP29Q9HBJ7 922 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 ZBTB26Q9HCK0 441 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 FBRSL1Q9HCM7 1045 aaKnown RBP13.54□□□□□ -0.24
VCP-201ENST00000358901 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 CASKO14936 926 aa13.54□□□□□ -0.24
VCP-201ENST00000358901 ARPC2O15144 300 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms