RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SPRED3Q2MJR0 410 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 RPS27LQ71UM5 84 aaKnown RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 TMPRSS6Q8IU80 811 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 PELI3Q8N2H9 469 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 PPM1EQ8WY54 764 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 ELMO1Q92556 727 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 FAM131CQ96AQ9 280 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 CDX2Q99626 313 aaPredicted RBP21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 FBXL12Q9NXK8 326 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 SERGEFQ9UGK8 458 aa21.11■□□□□ 0.97
TSPAN3-202ENST00000346495 ANKRD65E5RJM6 399 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 K7ESM1 405 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 FCHO1O14526 889 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 FFAR2O15552 330 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 NARSO43776 548 aaKnown RBP21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 SERPINA6P08185 405 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 SRFP11831 508 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 BOP1Q14137 746 aaKnown RBP21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 AGERQ15109 404 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 IER5LQ5T953 404 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 NEK10Q6ZWH5 1172 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 PDPRQ8NCN5 879 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 ASZ1Q8WWH4 475 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 FAM3CQ92520 227 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 CCM2Q9BSQ5 444 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 RDH14Q9HBH5 336 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 TRIM39Q9HCM9 518 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 SLC2A4RGQ9NR83 387 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 UTP6Q9NYH9 597 aaKnown RBP21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 ADAMTS6Q9UKP5 1117 aa21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 TNPO3Q9Y5L0 923 aaKnown RBP21.1■□□□□ 0.97
TSPAN3-202ENST00000346495 SZT2Q5T011 3432 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 LRRC14BA6NHZ5 514 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 TRPC5OSA6NMA1 111 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 ATP5HO75947 161 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 SCTRP47872 440 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 CORO7P57737 925 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 CLCQ05315 142 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 GTF2H3Q13889 308 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 LEXMQ3ZCV2 418 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 BCL7AQ4VC05 210 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 EOGTQ5NDL2 527 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 VWA5B1Q5TIE3 1220 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 FAM91A1Q658Y4 838 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 TMEM220Q6QAJ8 160 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 ADAMTSL4Q6UY14 1074 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 MAPK15Q8TD08 544 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 ZNF483Q8TF39 744 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 NMUR2Q9GZQ4 415 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 CD248Q9HCU0 757 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 SAR1AQ9NR31 198 aa21.09■□□□□ 0.97
TSPAN3-202ENST00000346495 UBFD1O14562 309 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 PLRG1O43660 514 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 CDK14O94921 469 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 C8GP07360 202 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 VCLP18206 1134 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 CTSCP53634 463 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 CDH13P55290 713 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 TDGQ13569 410 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 TTC31Q49AM3 519 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 SLC44A4Q53GD3 710 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 PNCKQ6P2M8 343 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 ADGRG6Q86SQ4 1221 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 BEND7Q8N7W2 519 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 HIC2Q96JB3 615 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 TUBB6Q9BUF5 446 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 TXLNGQ9NUQ3 528 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 PCTPQ9UKL6 214 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 SORCS3Q9UPU3 1222 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 TRAF6Q9Y4K3 522 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 TRIOBPQ9H2D6 2365 aa21.08■□□□□ 0.97
TSPAN3-202ENST00000346495 SLC16A5O15375 505 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 VEGFDO43915 354 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 GPC4O75487 556 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 ENO2P09104 434 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 C7P10643 843 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 FOSL2P15408 326 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TSPAN8P19075 237 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 AGTR2P50052 363 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 RPS21P63220 83 aaKnown RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SFSWAPQ12872 951 aaKnown RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 LCP2Q13094 533 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SP140Q13342 867 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 PCBP2Q15366 365 aaKnown RBP eCLIP21.07■□□□□ 0.967e-7■■■■■ 27.7
TSPAN3-202ENST00000346495 SYTL3Q4VX76 610 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SLC9B1Q4ZJI4 515 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SULT1C3Q6IMI6 304 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 KIAA1161Q6NSJ0 714 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 ACAD11Q709F0 780 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 RPLP0P6Q8NHW5 317 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 ZNF514Q96K75 400 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 NSUN5Q96P11 429 aaKnown RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 NUF2Q9BZD4 464 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 CDYLQ9Y232 598 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 MYO10Q9HD67 2058 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 TMEM233B4DJY2 109 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 SLCO2B1O94956 709 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 MLYCDO95822 493 aa21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 ACTN3Q08043 901 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-202ENST00000346495 KRT72Q14CN4 511 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms