RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CCDC126Q96EE4 140 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SCRN2Q96FV2 425 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 RHOVQ96L33 236 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 KLHL32Q96NJ5 620 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 LYSMD1Q96S90 227 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ATOH8Q96SQ7 321 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 BTBD10Q9BSF8 475 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CADM1Q9BY67 442 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 CPEB1Q9BZB8 566 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 BHLHE41Q9C0J9 482 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 DERL2Q9GZP9 239 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 NKX2-4Q9H2Z4 354 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 GSTO2Q9H4Y5 243 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TFB2MQ9H5Q4 396 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 SYTL2Q9HCH5 934 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 ZMYM5Q9UJ78 669 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TRMT6Q9UJA5 497 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 FIS1Q9Y3D6 152 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 PRSS21Q9Y6M0 314 aa9.13□□□□□ -0.95
ATG4A-202ENST00000345734 TCF20Q9UGU0 1960 aaKnown RBP9.13□□□□□ -0.95
ATG4A-202ENST00000345734 GLYATL1P3A0A0U1RQE8 302 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 OTOL1A6NHN0 477 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 RFXAPO00287 272 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 UBFD1O14562 309 aaKnown RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 PRMT5O14744 637 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 SMIM24O75264 130 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 SIX3O95343 332 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 ESR1P03372 595 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 PYGLP06737 847 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 ADH5P11766 374 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 CD1EP15812 388 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 ITGB6P18564 788 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 IMPDH1P20839 514 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 ITPKAP23677 461 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 SERPINB5P36952 375 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 CLCN7P51798 805 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 PFKFB4Q16877 469 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 FBXO48Q5FWF7 155 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 ZNF678Q5SXM1 525 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 RARS2Q5T160 578 aaKnown RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 CWF19L1Q69YN2 538 aaKnown RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 TPRG1Q6ZUI0 275 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 FRMD7Q6ZUT3 714 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 CUZD1Q86UP6 607 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 NPAS3Q8IXF0 933 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 CPNE9Q8IYJ1 553 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 ZNF366Q8N895 744 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 GPR26Q8NDV2 337 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 RHEBL1Q8TAI7 183 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 LKAAEAR1Q8TD35 194 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 EEF1AKMT1Q8WVE0 214 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 KIAA1191Q96A73 305 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 RAB3IPQ96QF0 476 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 CIPCQ9C0C6 399 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 EBF3Q9H4W6 596 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 BRD9Q9H8M2 597 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 TCF7L2Q9NQB0 619 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 TAS2R1Q9NYW7 299 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 TAGLN3Q9UI15 199 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 FBXO10Q9UK96 956 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 PPIL1Q9Y3C6 166 aa9.12□□□□□ -0.95
ATG4A-202ENST00000345734 KIF26AQ9ULI4 1882 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-202ENST00000345734 B2RBV5 119 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 SUPT3HB4E1H0 165 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 E5RI56 91 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 TPD52L2O43399 206 aaKnown RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 HNRNPCL1O60812 293 aaKnown RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 KERAO60938 352 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 SUPT3HO75486 399 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 ECI2O75521 394 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 LEFTY1O75610 366 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 SUPT7LO94864 414 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 TPBGLP0DKB5 382 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 BMP4P12644 408 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 AOC1P19801 751 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 ITGALP20701 1170 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 ACRV1P26436 265 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 TPP2P29144 1249 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 SPAM1P38567 509 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 SLC6A11P48066 632 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 DGKGP49619 791 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 ADARP55265 1226 aaKnown RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 CDH13P55290 713 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 NFKB2Q00653 900 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 KCNC3Q14003 757 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 SNCBQ16143 134 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 LSM12Q3MHD2 195 aaKnown RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 GDPD4Q6W3E5 623 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 CCDC81Q6ZN84 652 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 USP45Q70EL2 814 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 GET4Q7L5D6 327 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 STK40Q8N2I9 435 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 CLDN19Q8N6F1 224 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 TEX9Q8N6V9 391 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 POU5F2Q8N7G0 328 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 ZNF557Q8N988 423 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 TMEM102Q8N9M5 508 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-202ENST00000345734 KCNJ9Q92806 393 aa9.11□□□□□ -0.95
ATG4A-202ENST00000345734 FGF13Q92913 245 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms