RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SMIM31A0A1B0GVY4 71 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 AQP12BA6NM10 295 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 URODP06132 367 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 HMOX2P30519 316 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 DGKQP52824 942 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 AP1S1P61966 158 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 PHKG1Q16816 387 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 SGO1Q5FBB7 561 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 LCN8Q6JVE9 175 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 NANOGP8Q6NSW7 305 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 MBOAT1Q6ZNC8 495 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 EPHX4Q8IUS5 362 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 AQP12AQ8IXF9 295 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 CMTR2Q8IYT2 770 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 ADGRG5Q8IZF4 528 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 ANKFN1Q8N957 763 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 C2orf49Q9BVC5 232 aaPredicted RBP14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 NANOGQ9H9S0 305 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 PFDN4Q9NQP4 134 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 STOML2Q9UJZ1 356 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 PCDHB1Q9Y5F3 818 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 RAD51BO15315 384 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 CXCL10P02778 98 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 ITGALP20701 1170 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 GABRR2P28476 465 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 CHRNA6Q15825 494 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 MYLK3Q32MK0 819 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 PDCD4Q53EL6 469 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 RETSATQ6NUM9 610 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 ZSWIM9Q86XI8 627 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 BBS7Q8IWZ6 715 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF558Q96NG5 402 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 SEPHS2Q99611 448 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 SMG9Q9H0W8 520 aaKnown RBP14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 GPBP1L1Q9HC44 474 aaPredicted RBP14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 CFAP97Q9P2B7 532 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 GNPTGQ9UJJ9 305 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 ANGPTL3Q9Y5C1 460 aa14.67□□□□□ -0.06
VIPAS39-202ENST00000343765 RNF103-CHMP3A0A140T963 221 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 FAM234BA2RU67 622 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 TRBC1P01850 177 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 BMP2P12643 396 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 BPIP17213 487 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 CD9P21926 228 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 FASP25445 335 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 STK19P49842 368 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 FOXM1Q08050 763 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 AP5B1Q2VPB7 878 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 COQ5Q5HYK3 327 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 LRRC73Q5JTD7 316 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 CERS6Q6ZMG9 384 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 MILR1Q7Z6M3 343 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 CARM1Q86X55 608 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 RBFAQ8N0V3 343 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 FAM47BQ8NA70 645 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 ZNF296Q8WUU4 475 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 LATS2Q9NRM7 1088 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 DUS2Q9NX74 493 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 WWOXQ9NZC7 414 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 OAZ3Q9UMX2 235 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 TRIM17Q9Y577 477 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 ANAPC1Q9H1A4 1944 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 HNRNPRO43390 633 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 GNAO1P09471 354 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 CD70P32970 193 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 CTSOP43234 321 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 MTPNP58546 118 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 LMAN2Q12907 356 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 PRKG2Q13237 762 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 RFTN2Q52LD8 501 aaPredicted RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 CYP20A1Q6UW02 462 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 Q6ZNB5 142 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 TSPAN14Q8NG11 270 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 MRPL17Q9NRX2 175 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 AGPAT4Q9NRZ5 378 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 FARSBQ9NSD9 589 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 TMCO1Q9UM00 188 aa14.66□□□□□ -0.06
VIPAS39-202ENST00000343765 GLYATL1P3A0A0U1RQE8 302 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 LSM1O15116 133 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 VILLO15195 856 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 TAPBPO15533 448 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 RSL1D1O76021 490 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 RGS4P49798 205 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 RPL38P63173 70 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 SELPLGQ14242 412 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 PCBP2Q15366 365 aaKnown RBP eCLIP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 SNX20Q7Z614 316 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 ZFAND4Q86XD8 727 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 HS6ST3Q8IZP7 471 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 ADGRG2Q8IZP9 1017 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC39A11Q8N1S5 342 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 CCT7Q99832 543 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 FAM126AQ9BYI3 521 aaPredicted RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 IL21Q9HBE4 155 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 ZIM2Q9NZV7 527 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 DNMT3BQ9UBC3 853 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 TNPO3Q9Y5L0 923 aaKnown RBP14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 SLC2A4P14672 509 aa14.65□□□□□ -0.06
VIPAS39-202ENST00000343765 ACRV1P26436 265 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms