RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 HIVEP1P15822 2718 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 E2F3O00716 465 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 ZG16O60844 167 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 KLF7O75840 302 aaPredicted RBP16.45■□□□□ 0.22
TRA2B-202ENST00000342294 LCA5LO95447 670 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 ALPPP05187 535 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 CD48P09326 243 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 PIRTP0C851 137 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 ITGA3P26006 1051 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 GLRBP48167 497 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 KPNA2P52292 529 aaKnown RBP16.45■□□□□ 0.22
TRA2B-202ENST00000342294 SOX8P57073 446 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 PLCL1Q15111 1095 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 FBXO38Q6PIJ6 1188 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 FAM83HQ6ZRV2 1179 aaPredicted RBP16.45■□□□□ 0.22
TRA2B-202ENST00000342294 ZC3H18Q86VM9 953 aaKnown RBP16.45■□□□□ 0.22
TRA2B-202ENST00000342294 GALNT16Q8N428 558 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 OR1L3Q8NH93 324 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 LRRN4Q8WUT4 740 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 IP6K3Q96PC2 410 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 TLR10Q9BXR5 811 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 MRPL47Q9HD33 250 aaKnown RBP16.45■□□□□ 0.22
TRA2B-202ENST00000342294 AGPAT4Q9NRZ5 378 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 FANCLQ9NW38 375 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 LIMA1Q9UHB6 759 aaKnown RBP16.45■□□□□ 0.22
TRA2B-202ENST00000342294 PSMD13Q9UNM6 376 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 SEC16AO15027 2179 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 SPTBP11277 2137 aa16.45■□□□□ 0.22
TRA2B-202ENST00000342294 HEATR9A2RTY3 570 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 POP7O75817 140 aaKnown RBP16.44■□□□□ 0.22
TRA2B-202ENST00000342294 MSL3P1P0C860 447 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 MTHFD1P11586 935 aaKnown RBP16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ARSEP51690 589 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 UBXN1Q04323 297 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 BECN1Q14457 450 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 PTCHD3Q3KNS1 767 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ATP13A5Q4VNC0 1218 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 DCAF10Q5QP82 559 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ZNF385CQ66K41 422 aaPredicted RBP16.44■□□□□ 0.22
TRA2B-202ENST00000342294 AMZ2Q86W34 360 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 OOSP2Q86WS3 158 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 TTC30BQ8N4P2 665 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ZADH2Q8N4Q0 377 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 CNTD1Q8N815 330 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ZFPM2Q8WW38 1151 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 FER1L6-AS2Q96M78 137 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 XPO4Q9C0E2 1151 aaKnown RBP16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ACTR5Q9H9F9 607 aaPredicted RBP16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ZBTB20Q9HC78 741 aaPredicted RBP16.44■□□□□ 0.22
TRA2B-202ENST00000342294 SYTL2Q9HCH5 934 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 SOHLH2Q9NX45 425 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 MYO6Q9UM54 1294 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 OSGIN2Q9Y236 505 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 ZNF711Q9Y462 761 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 PIKFYVEQ9Y2I7 2098 aa16.44■□□□□ 0.22
TRA2B-202ENST00000342294 OR6C74A6NCV1 312 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 SLC9B1P1A6NJY1 282 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 DDX3XO00571 662 aaKnown RBP eCLIP16.43■□□□□ 0.228e-59■■■□□ 18.9
TRA2B-202ENST00000342294 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
TRA2B-202ENST00000342294 KLHL41O60662 606 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 IPO13O94829 963 aaKnown RBP16.43■□□□□ 0.22
TRA2B-202ENST00000342294 OTX2P32243 289 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 HADHAP40939 763 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 PIGHQ14442 188 aaPredicted RBP16.43■□□□□ 0.22
TRA2B-202ENST00000342294 KRT81Q14533 505 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 SSPNQ14714 243 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 HGSNATQ68CP4 663 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 APTXQ7Z2E3 356 aaKnown RBP16.43■□□□□ 0.22
TRA2B-202ENST00000342294 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
TRA2B-202ENST00000342294 NIPA2Q8N8Q9 360 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 TM9SF4Q92544 642 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 DPH2Q9BQC3 489 aaPredicted RBP16.43■□□□□ 0.22
TRA2B-202ENST00000342294 DHRS4Q9BTZ2 278 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 RUBCNLQ9H714 662 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
TRA2B-202ENST00000342294 PRSS44E7EML9 344 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 MYBL1P10243 752 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 CTSCP53634 463 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 ADCY2Q08462 1091 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 SLC10A2Q12908 348 aaPredicted RBP16.42■□□□□ 0.22
TRA2B-202ENST00000342294 GTF2H3Q13889 308 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 DPYSL3Q14195 570 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 NFE2L1Q14494 772 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 ZXDCQ2QGD7 858 aaPredicted RBP16.42■□□□□ 0.22
TRA2B-202ENST00000342294 KRTAP21-3Q3LHN1 58 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 METRNLQ641Q3 311 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 RASGEF1AQ8N9B8 481 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 CLEC1AQ8NC01 280 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 BRSK1Q8TDC3 778 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 INSM2Q96T92 566 aaPredicted RBP16.42■□□□□ 0.22
TRA2B-202ENST00000342294 GPR63Q9BZJ6 419 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 HAUS4Q9H6D7 363 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 KIR3DX1Q9H7L2 352 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 FANCEQ9HB96 536 aa16.42■□□□□ 0.22
TRA2B-202ENST00000342294 IMP3Q9NV31 184 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms