RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 C14orf28Q4W4Y0 310 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 TEDDM1Q5T9Z0 273 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 PTRHD1Q6GMV3 140 aaKnown RBP16.42■□□□□ 0.22
SFN-201ENST00000339276 GUSBP11Q6P575 273 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 GLRX5Q86SX6 157 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 LRRC6Q86X45 466 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 CNTN4Q8IWV2 1026 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 KRT222Q8N1A0 295 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 C2CD4AQ8NCU7 369 aaPredicted RBP16.42■□□□□ 0.22
SFN-201ENST00000339276 GLMNQ92990 594 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 BIRC8Q96P09 236 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 VPS37BQ9H9H4 285 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 MOCS1Q9NZB8 636 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 SCHIP1Q9P0W5 487 aaPredicted RBP16.42■□□□□ 0.22
SFN-201ENST00000339276 PADI4Q9UM07 663 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 PSMD13Q9UNM6 376 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 WDR37Q9Y2I8 494 aa16.42■□□□□ 0.22
SFN-201ENST00000339276 PCNX2A6NKB5 2137 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 C17orf113A0A1B0GUU1 675 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 KLHL33A6NCF5 533 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 BRAFP15056 766 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 ID4P47928 161 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 ACADVLP49748 655 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 SIM1P81133 766 aaPredicted RBP16.41■□□□□ 0.22
SFN-201ENST00000339276 MGAT5Q09328 741 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.22
SFN-201ENST00000339276 UBAP2Q5T6F2 1119 aaKnown RBP16.41■□□□□ 0.22
SFN-201ENST00000339276 METRNLQ641Q3 311 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 CNSTQ6PJW8 725 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 NAPRTQ6XQN6 538 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 C17orf82Q86X59 251 aaPredicted RBP16.41■□□□□ 0.22
SFN-201ENST00000339276 GSPT2Q8IYD1 628 aaKnown RBP16.41■□□□□ 0.22
SFN-201ENST00000339276 CFAP206Q8IYR0 622 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 SLC37A2Q8TED4 501 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 ELMO1Q92556 727 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 ANKZF1Q9H8Y5 726 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 COG4Q9H9E3 785 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 LRRC4CQ9HCJ2 640 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 SMYD2Q9NRG4 433 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 TOR4AQ9NXH8 423 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 NCKIPSDQ9NZQ3 722 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 VPS9D1Q9Y2B5 631 aa16.41■□□□□ 0.22
SFN-201ENST00000339276 DCHS1Q96JQ0 3298 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 GOLGA4Q13439 2230 aaKnown RBP16.4■□□□□ 0.22
SFN-201ENST00000339276 TCRBV9S1A1TA0A576 114 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 CPED1A4D0V7 1026 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 NIPSNAP2O75323 286 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 PIAS1O75925 651 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 HAUS5O94927 633 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 TRIM16O95361 564 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ACP1P24666 158 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 GABRB3P28472 473 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 CCR7P32248 378 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ABCG1P45844 678 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 PREPP48147 710 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 LEPRP48357 1165 aaKnown RBP16.4■□□□□ 0.22
SFN-201ENST00000339276 RPIAP49247 311 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ADARP55265 1226 aaKnown RBP16.4■□□□□ 0.22
SFN-201ENST00000339276 BOP1Q14137 746 aaKnown RBP16.4■□□□□ 0.22
SFN-201ENST00000339276 BRD3Q15059 726 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 CCDC157Q569K6 752 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 AGAP9Q5VTM2 703 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ZNF549Q6P9A3 640 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ABRAXAS1Q6UWZ7 409 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 WASH2PQ6VEQ5 465 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 CEP128Q6ZU80 1094 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 C3orf62Q6ZUJ4 267 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 SFRP1Q8N474 314 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ARL14Q8N4G2 192 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 GABPB2Q8TAK5 448 aaPredicted RBP16.4■□□□□ 0.22
SFN-201ENST00000339276 MAPK15Q8TD08 544 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 WASH6PQ9NQA3 447 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 NINJ2Q9NZG7 142 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 ZFATQ9P243 1243 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.4■□□□□ 0.22
SFN-201ENST00000339276 PCDHB1Q9Y5F3 818 aa16.4■□□□□ 0.22
SFN-201ENST00000339276 V9GYY5 206 aaPredicted RBP16.4■□□□□ 0.22
SFN-201ENST00000339276 EME2A4GXA9 379 aaPredicted RBP16.39■□□□□ 0.21
SFN-201ENST00000339276 OR52A4PA6NMU1 304 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 F8W8V4 182 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 ESR1P03372 595 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 GSTA2P09210 222 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 GSTM1P09488 218 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 FTH1P19P0C7X4 201 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 MYBL2P10244 700 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 PKMP14618 531 aaKnown RBP16.39■□□□□ 0.21
SFN-201ENST00000339276 SLC2A4P14672 509 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 DUSP3P51452 185 aaPredicted RBP16.39■□□□□ 0.21
SFN-201ENST00000339276 GSTM4Q03013 218 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 CLCA4Q14CN2 919 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 KYNUQ16719 465 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 SYTL3Q4VX76 610 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 PPM1JQ5JR12 505 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 PERM1Q5SV97 790 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 KIAA0408Q6ZU52 694 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 EFL1Q7Z2Z2 1120 aaKnown RBP16.39■□□□□ 0.21
SFN-201ENST00000339276 SLCO6A1Q86UG4 719 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
SFN-201ENST00000339276 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms