RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 XRCC1P18887 633 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CDH3P22223 829 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 CRABP2P29373 138 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 RAD23AP54725 363 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 SMAD4Q13485 552 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 INO80DQ53TQ3 878 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 LRRC73Q5JTD7 316 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 PIWIL4Q7Z3Z4 852 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 FAM3CQ92520 227 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 NXPE3Q969Y0 559 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 IL36AQ9UHA7 158 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 SH3GLB1Q9Y371 365 aa11.67□□□□□ -0.54
HDAC6-201ENST00000334136 TDRD15B5MCY1 1934 aaKnown RBP11.67□□□□□ -0.54
HDAC6-201ENST00000334136 MYO18AQ92614 2054 aaKnown RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 KLF8O95600 359 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CYP17A1P05093 508 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 MLNP12872 115 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 IVDP26440 423 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CHRNA4P43681 627 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 RPL34P49207 117 aaKnown RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 SLC10A2Q12908 348 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CDHR3Q6ZTQ4 885 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 SLC22A9Q8IVM8 553 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TRIM48Q8IWZ4 208 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 NPWQ8N729 165 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TERB1Q8NA31 727 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ANAPC2Q9UJX6 822 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 LILRB3O75022 631 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 GM2AP17900 193 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CCR2P41597 374 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 SEMG2Q02383 582 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 RUNX1T1Q06455 604 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CBX3Q13185 183 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 DEPDC1Q5TB30 811 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 RSBN1Q5VWQ0 802 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ABRAXAS1Q6UWZ7 409 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 SPPL2CQ8IUH8 684 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TRAPPC5Q8IUR0 188 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CENPLQ8N0S6 344 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 HSPBAP1Q96EW2 488 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 PSKH2Q96QS6 385 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 MYADMQ96S97 322 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TCF12Q99081 682 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CDX2Q99626 313 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 COQ10BQ9H8M1 238 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 IMPAD1Q9NX62 359 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 FBXO10Q9UK96 956 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TBC1D30Q9Y2I9 924 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 FADS3Q9Y5Q0 445 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CCDC154A6NI56 674 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 T-ENOLP0DO92 83 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 CCNA2P20248 432 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ATP5F1P24539 256 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 PWP1Q13610 501 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 SLC9B1Q4ZJI4 515 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ZNF776Q68DI1 518 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-201ENST00000334136 NANOGNBQ7Z5D8 188 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TP53INP2Q8IXH6 220 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 OR8H2Q8N162 312 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ARL10Q8N8L6 244 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 TRPC4APQ8TEL6 797 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 OTULINQ96BN8 352 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 ACOX2Q99424 681 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 HMG20AQ9NP66 347 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 IL37Q9NZH6 218 aa11.66□□□□□ -0.54
HDAC6-201ENST00000334136 FAM92AA1XBS5 289 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 DRGXA6NNA5 263 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 OR56A5P0C7T3 313 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 HGFP14210 728 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 GLDCP23378 1020 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 ATP6V1E1P36543 226 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 MTTPP55157 894 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 TDGQ13569 410 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SPESP1Q6UW49 350 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 PARM1Q6UWI2 310 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 FAM151BQ6UXP7 276 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SYTL1Q8IYJ3 562 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 STK40Q8N2I9 435 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 FBXO39Q8N4B4 442 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 AGAP2Q99490 1192 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SYNDIG1Q9H7V2 258 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.54
HDAC6-201ENST00000334136 TIMMDC1Q9NPL8 285 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 FBXL12Q9NXK8 326 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 DGKBQ9Y6T7 804 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 PTPRZ1P23471 2315 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SLC31A1O15431 190 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SLC25A14O95258 325 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-201ENST00000334136 ALOX12P18054 663 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 POU1F1P28069 291 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 GJA4P35212 333 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SLC18A1P54219 525 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 NRG1Q02297 640 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-201ENST00000334136 KLF1Q13351 362 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-201ENST00000334136 SIX1Q15475 284 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-201ENST00000334136 FBXO43Q4G163 708 aa11.65□□□□□ -0.54
HDAC6-201ENST00000334136 EGFLAMQ63HQ2 1017 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms