RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 RAB23Q9ULC3 237 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PRR23D1E9PI22 279 aaPredicted RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CDC7O00311 574 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PER2O15055 1255 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 FAM163BP0C2L3 166 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PRR23D2P0DMB1 279 aaPredicted RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 GPR17Q13304 367 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 MPP2Q14168 576 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 PCLAFQ15004 111 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 TRIM40Q6P9F5 258 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 CHSY3Q70JA7 882 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 OSBPL6Q9BZF3 934 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 OR2AG1Q9H205 316 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 SUV39H2Q9H5I1 410 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 MAPRE3Q9UPY8 281 aa12.85□□□□□ -0.35
VSTM4-202ENST00000332853 COL16A1Q07092 1604 aaPredicted RBP12.85□□□□□ -0.35
VSTM4-202ENST00000332853 TSPAN19P0C672 248 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 PRKCHP24723 683 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 CLDN10P78369 228 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 TRIM25Q14258 630 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 EEF1AKMT1Q8WVE0 214 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 EXOSC8Q96B26 276 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 MTERF1Q99551 399 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 TFB2MQ9H5Q4 396 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 TMEM248Q9NWD8 314 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF232Q9UNY5 417 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 STX16-NPEPL1H3BU86 382 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 RASGRP1O95267 797 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 CDC42P60953 191 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 SLC20A2Q08357 652 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 SLC39A3Q9BRY0 314 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 SLC27A6Q9Y2P4 619 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 IFNGR2P38484 337 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ST13P50502 369 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 AQP4P55087 323 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 TBC1D21Q8IYX1 336 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 DPP10Q8N608 796 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 PNPLA8Q9NP80 782 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 PHPT1Q9NRX4 125 aaPredicted RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF780BQ9Y6R6 833 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 FAM174BQ3ZCQ3 159 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 RNF220Q5VTB9 566 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ZNF599Q96NL3 588 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 AKTIPQ9H8T0 292 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 TOR4AQ9NXH8 423 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ENOPH1Q9UHY7 261 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ELOVL7A1L3X0 281 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 PTGESO14684 152 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 AXIN1O15169 862 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 SLC31A1O15431 190 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 YAP1P46937 504 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 TRAF3Q13114 568 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 SNAP47Q5SQN1 464 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 RNF44Q7L0R7 432 aa12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ZCCHC7Q8N3Z6 543 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 REXO4Q9GZR2 422 aaKnown RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
VSTM4-202ENST00000332853 ANKRD66B4E2M5 251 aa12.83□□□□□ -0.35
VSTM4-202ENST00000332853 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.35
VSTM4-202ENST00000332853 TDRD1Q9BXT4 1180 aaKnown RBP12.83□□□□□ -0.35
VSTM4-202ENST00000332853 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.35
VSTM4-202ENST00000332853 IL36AQ9UHA7 158 aa12.83□□□□□ -0.35
VSTM4-202ENST00000332853 IL6P05231 212 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 ENO2P09104 434 aaPredicted RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 ALOX12P18054 663 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 HMGCS1Q01581 520 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 MBLAC2Q68D91 279 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 MED27Q6P2C8 311 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 GDPD4Q6W3E5 623 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 ARMC8Q8IUR7 673 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 OR52J3Q8NH60 311 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 IGSF8Q969P0 613 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 KCNA7Q96RP8 456 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 GPR22Q99680 433 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 CEP44Q9C0F1 390 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 MAT2BQ9NZL9 334 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 CAB39Q9Y376 341 aaPredicted RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 WNT6Q9Y6F9 365 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 COCHO43405 550 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 KDELR3O43731 214 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 GALTP07902 379 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 MTHFD1P11586 935 aaKnown RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 CSNK2BP67870 215 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 DPYSQ14117 519 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 TEAD2Q15562 447 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 RIOK2Q9BVS4 552 aaKnown RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 RASSF1Q9NS23 344 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 ITGAXP20702 1163 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.36
VSTM4-202ENST00000332853 PRMT2P55345 433 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 C21orf59P57076 290 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 DGUOKQ16854 277 aa12.83□□□□□ -0.36
VSTM4-202ENST00000332853 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms