RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 BCL7AQ4VC05 210 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 SEL1L3Q68CR1 1132 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 PAQR3Q6TCH7 311 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 MYO1HQ8N1T3 1032 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 PPP1R14CQ8TAE6 165 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 STAG3L4Q8TBR4 150 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 CD200R1Q8TD46 325 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 PCED1AQ9H1Q7 454 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 WDR26Q9H7D7 661 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 SARS2Q9NP81 518 aaKnown RBP17.76■□□□□ 0.43
SYNE4-201ENST00000324444 IGSF5Q9NSI5 407 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 COPG2Q9UBF2 871 aa17.76■□□□□ 0.43
SYNE4-201ENST00000324444 ZFR2Q9UPR6 939 aaKnown RBP17.76■□□□□ 0.43
SYNE4-201ENST00000324444 DNMT3AQ9Y6K1 912 aaPredicted RBP17.76■□□□□ 0.43
SYNE4-201ENST00000324444 ABCA7Q8IZY2 2146 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 NCOR2Q9Y618 2525 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 GMNCA6NCL1 334 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 KLF11O14901 512 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 SNUPNO95149 360 aaKnown RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 SEMA4FO95754 770 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 PAK4O96013 591 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 SOD1P00441 154 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 BPGMP07738 259 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 HOXC4P09017 264 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 GRK2P25098 689 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 TRIM23P36406 574 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 CCR5P51681 352 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 NAA20P61599 178 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 B4GALNT1Q00973 533 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 TIAL1Q01085 375 aaKnown RBP eCLIP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 ZNF460Q14592 562 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 SF3A2Q15428 464 aaKnown RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 SLC22A9Q8IVM8 553 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 PLD6Q8N2A8 252 aaKnown RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 FSTL5Q8N475 847 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 CLDN19Q8N6F1 224 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 PNPLA1Q8N8W4 532 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 TP53I13Q8NBR0 393 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 FAM174AQ8TBP5 190 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 NETO1Q8TDF5 533 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 ASZ1Q8WWH4 475 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 CHMP6Q96FZ7 201 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 COX14Q96I36 57 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 TEX101Q9BY14 249 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 SMOC1Q9H4F8 434 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 MANSC1Q9H8J5 431 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 RMI1Q9H9A7 625 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 MLXIPLQ9NP71 852 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 CNOT6Q9ULM6 557 aaKnown RBP17.75■□□□□ 0.43
SYNE4-201ENST00000324444 DMTF1Q9Y222 760 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 MED16Q9Y2X0 877 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 PCDHGA5Q9Y5G8 931 aa17.75■□□□□ 0.43
SYNE4-201ENST00000324444 INPP4BO15327 924 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 GDF9O60383 454 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 FOXD2O60548 495 aaPredicted RBP17.74■□□□□ 0.43
SYNE4-201ENST00000324444 SMIM24O75264 130 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 PCCBP05166 539 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 ZNF806P0C7X5 589 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 TPBGLP0DKB5 382 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 CD1DP15813 335 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 KELP23276 732 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 CD6P30203 668 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 AKT2P31751 481 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 MPLP40238 635 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 PRLHRP49683 370 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 C16orf46Q6P387 395 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 ZYG11AQ6WRX3 759 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 MICALCLQ6ZW33 695 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 NEK10Q6ZWH5 1172 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 FAM124AQ86V42 546 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 PIM3Q86V86 326 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 SIDT2Q8NBJ9 832 aaKnown RBP17.74■□□□□ 0.43
SYNE4-201ENST00000324444 KIAA1191Q96A73 305 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 LINC00615Q96LM1 132 aaPredicted RBP17.74■□□□□ 0.43
SYNE4-201ENST00000324444 GPR78Q96P69 363 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 CCM2Q9BSQ5 444 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 EPN3Q9H201 632 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 SIRPGQ9P1W8 387 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 EMCNQ9ULC0 261 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 PRSS21Q9Y6M0 314 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 PLXNB3Q9ULL4 1909 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 DOCK9Q9BZ29 2069 aa17.74■□□□□ 0.43
SYNE4-201ENST00000324444 C17orf113A0A1B0GUU1 675 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 CACNB4O00305 520 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-201ENST00000324444 FPGTO14772 594 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 KCNJ13O60928 360 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 TFEBP19484 476 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 BCKDHBP21953 392 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 HNRNPA2B1P22626 353 aaKnown RBP17.73■□□□□ 0.43
SYNE4-201ENST00000324444 ATP5F1P24539 256 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-201ENST00000324444 CDK3Q00526 305 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 IRF4Q15306 451 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 AASDHQ4L235 1098 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-201ENST00000324444 TECRLQ5HYJ1 363 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 ADAMTSL2Q86TH1 951 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 HEATR4Q86WZ0 1026 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 RLN3Q8WXF3 142 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 ZNF75CPQ92670 426 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-201ENST00000324444 GRAMD1AQ96CP6 724 aa17.73■□□□□ 0.43
SYNE4-201ENST00000324444 LINGO1Q96FE5 620 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms