RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 S100A3P33764 101 aa15.08■□□□□ 0
VARS2-201ENST00000321897 SOX6P35712 828 aa15.08■□□□□ 0
VARS2-201ENST00000321897 LAPTM4AQ15012 233 aa15.08■□□□□ 0
VARS2-201ENST00000321897 ARHGEF6Q15052 776 aa15.08■□□□□ 0
VARS2-201ENST00000321897 ZC3H12BQ5HYM0 836 aaKnown RBP15.08■□□□□ 0
VARS2-201ENST00000321897 KIAA0319Q5VV43 1072 aa15.08■□□□□ 0
VARS2-201ENST00000321897 AHSA2Q719I0 299 aa15.08■□□□□ 0
VARS2-201ENST00000321897 IPPKQ9H8X2 491 aa15.08■□□□□ 0
VARS2-201ENST00000321897 EIF2B3Q9NR50 452 aaKnown RBP15.08■□□□□ 0
VARS2-201ENST00000321897 DKK3Q9UBP4 350 aa15.08■□□□□ 0
VARS2-201ENST00000321897 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
VARS2-201ENST00000321897 CEPT1Q9Y6K0 416 aa15.08■□□□□ 0
VARS2-201ENST00000321897 NUP214P35658 2090 aaPredicted RBP15.08■□□□□ 0
VARS2-201ENST00000321897 G3V2T6 193 aa15.08■□□□□ 0
VARS2-201ENST00000321897 PGLSO95336 258 aa15.08■□□□□ 0
VARS2-201ENST00000321897 BMXP51813 675 aa15.08■□□□□ 0
VARS2-201ENST00000321897 IRF8Q02556 426 aa15.08■□□□□ 0
VARS2-201ENST00000321897 ZBTB26Q9HCK0 441 aa15.08■□□□□ 0
VARS2-201ENST00000321897 EMCNQ9ULC0 261 aa15.08■□□□□ 0
VARS2-201ENST00000321897 COL22A1Q8NFW1 1626 aaPredicted RBP15.08■□□□□ 0
VARS2-201ENST00000321897 ZCWPW2A0A1B0GU75 182 aa15.07■□□□□ 0
VARS2-201ENST00000321897 PRAMEF1O95521 474 aa15.07■□□□□ 0
VARS2-201ENST00000321897 CHRM5P08912 532 aaPredicted RBP15.07■□□□□ 0
VARS2-201ENST00000321897 IL12RB1P42701 662 aa15.07■□□□□ 0
VARS2-201ENST00000321897 ZNF534Q76KX8 674 aa15.07■□□□□ 0
VARS2-201ENST00000321897 CDKN2AIPNLQ96HQ2 116 aa15.07■□□□□ 0
VARS2-201ENST00000321897 VPS4AQ9UN37 437 aa15.07■□□□□ 0
VARS2-201ENST00000321897 PDE10AQ9Y233 779 aa15.07■□□□□ 0
VARS2-201ENST00000321897 A0A0U1RQF3 1178 aa15.07■□□□□ 0
VARS2-201ENST00000321897 ANGPTL1O95841 491 aa15.07■□□□□ 0
VARS2-201ENST00000321897 KRT6AP02538 564 aa15.07■□□□□ 0
VARS2-201ENST00000321897 CHRNA1P02708 482 aa15.07■□□□□ 0
VARS2-201ENST00000321897 KRT6BP04259 564 aa15.07■□□□□ 0
VARS2-201ENST00000321897 FMO3P31513 532 aa15.07■□□□□ 0
VARS2-201ENST00000321897 KRT6CP48668 564 aa15.07■□□□□ 0
VARS2-201ENST00000321897 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 0
VARS2-201ENST00000321897 TMEM236Q5W0B7 351 aa15.07■□□□□ 0
VARS2-201ENST00000321897 TXNDC8Q6A555 127 aa15.07■□□□□ 0
VARS2-201ENST00000321897 EFL1Q7Z2Z2 1120 aaKnown RBP15.07■□□□□ 0
VARS2-201ENST00000321897 RBM23Q86U06 439 aaKnown RBP15.07■□□□□ 0
VARS2-201ENST00000321897 TBC1D21Q8IYX1 336 aa15.07■□□□□ 0
VARS2-201ENST00000321897 LILRA2Q8N149 483 aa15.07■□□□□ 0
VARS2-201ENST00000321897 RDH11Q8TC12 318 aa15.07■□□□□ 0
VARS2-201ENST00000321897 RAB2BQ8WUD1 216 aa15.07■□□□□ 0
VARS2-201ENST00000321897 ANKRD49Q8WVL7 239 aa15.07■□□□□ 0
VARS2-201ENST00000321897 FAM126AQ9BYI3 521 aaPredicted RBP15.07■□□□□ 0
VARS2-201ENST00000321897 ZNF556Q9HAH1 456 aa15.07■□□□□ 0
VARS2-201ENST00000321897 GMPR2Q9P2T1 348 aaKnown RBP15.07■□□□□ 0
VARS2-201ENST00000321897 MTRRQ9UBK8 725 aa15.07■□□□□ 0
VARS2-201ENST00000321897 NME7Q9Y5B8 376 aa15.07■□□□□ 0
VARS2-201ENST00000321897 KCNA5P22460 613 aa15.07■□□□□ 0
VARS2-201ENST00000321897 PRKACGP22612 351 aa15.07■□□□□ 0
VARS2-201ENST00000321897 CPOXP36551 454 aa15.07■□□□□ 0
VARS2-201ENST00000321897 MEP1AQ16819 746 aa15.07■□□□□ 0
VARS2-201ENST00000321897 ZNF423Q2M1K9 1284 aa15.07■□□□□ 0
VARS2-201ENST00000321897 ZFP69Q49AA0 526 aa15.07■□□□□ 0
VARS2-201ENST00000321897 MS4A13Q5J8X5 152 aa15.07■□□□□ 0
VARS2-201ENST00000321897 OTOP2Q7RTS6 562 aa15.07■□□□□ 0
VARS2-201ENST00000321897 TRAPPC5Q8IUR0 188 aa15.07■□□□□ 0
VARS2-201ENST00000321897 MUS81Q96NY9 551 aa15.07■□□□□ 0
VARS2-201ENST00000321897 UGT2B28Q9BY64 529 aa15.07■□□□□ 0
VARS2-201ENST00000321897 PSME2Q9UL46 239 aa15.07■□□□□ 0
VARS2-201ENST00000321897 LAMB1P07942 1786 aa15.07■□□□□ 0
VARS2-201ENST00000321897 NOTOA8MTQ0 251 aa15.07■□□□□ 0
VARS2-201ENST00000321897 SEPT4O43236 478 aa15.07■□□□□ 0
VARS2-201ENST00000321897 ATE1O95260 518 aa15.07■□□□□ 0
VARS2-201ENST00000321897 TTPAP49638 278 aa15.07■□□□□ 0
VARS2-201ENST00000321897 MOGQ16653 247 aa15.07■□□□□ 0
VARS2-201ENST00000321897 TJAP1Q5JTD0 557 aa15.07■□□□□ 0
VARS2-201ENST00000321897 AFTPHQ6ULP2 937 aa15.07■□□□□ 0
VARS2-201ENST00000321897 NKAPQ8N5F7 415 aaKnown RBP15.07■□□□□ 0
VARS2-201ENST00000321897 MCOLN3Q8TDD5 553 aa15.07■□□□□ 0
VARS2-201ENST00000321897 S100ZQ8WXG8 99 aa15.07■□□□□ 0
VARS2-201ENST00000321897 GPR62Q9BZJ7 368 aa15.07■□□□□ 0
VARS2-201ENST00000321897 POLR3BQ9NW08 1133 aaPredicted RBP15.07■□□□□ 0
VARS2-201ENST00000321897 PRORSD1PA6NEY8 169 aa15.06■□□□□ 0
VARS2-201ENST00000321897 SERPINI2O75830 405 aa15.06■□□□□ 0
VARS2-201ENST00000321897 CLPXO76031 633 aa15.06■□□□□ 0
VARS2-201ENST00000321897 GJB5O95377 273 aa15.06■□□□□ 0
VARS2-201ENST00000321897 DGKEP52429 567 aa15.06■□□□□ 0
VARS2-201ENST00000321897 BNIP2Q12982 314 aa15.06■□□□□ 0
VARS2-201ENST00000321897 UBXN11Q5T124 520 aa15.06■□□□□ 0
VARS2-201ENST00000321897 PAQR9Q6ZVX9 377 aa15.06■□□□□ 0
VARS2-201ENST00000321897 CDH24Q86UP0 819 aa15.06■□□□□ 0
VARS2-201ENST00000321897 CPSF7Q8N684 471 aaKnown RBP15.06■□□□□ 0
VARS2-201ENST00000321897 AMER2Q8N7J2 671 aa15.06■□□□□ 0
VARS2-201ENST00000321897 OR10A6Q8NH74 314 aa15.06■□□□□ 0
VARS2-201ENST00000321897 OR52E6Q96RD3 313 aa15.06■□□□□ 0
VARS2-201ENST00000321897 EBPLQ9BY08 206 aa15.06■□□□□ 0
VARS2-201ENST00000321897 SMG9Q9H0W8 520 aaKnown RBP15.06■□□□□ 0
VARS2-201ENST00000321897 WDR6Q9NNW5 1121 aaKnown RBP15.06■□□□□ 0
VARS2-201ENST00000321897 C5orf58C9J3I9 102 aa15.06■□□□□ 0
VARS2-201ENST00000321897 PLOD2O00469 737 aa15.06■□□□□ 0
VARS2-201ENST00000321897 PRMT5O14744 637 aaPredicted RBP15.06■□□□□ 0
VARS2-201ENST00000321897 NDUFS2O75306 463 aa15.06■□□□□ 0
VARS2-201ENST00000321897 SNNO75324 88 aaPredicted RBP15.06■□□□□ 0
VARS2-201ENST00000321897 ALOX5P09917 674 aa15.06■□□□□ 0
VARS2-201ENST00000321897 AIF1P55008 147 aa15.06■□□□□ 0
VARS2-201ENST00000321897 CYP4F8P98187 520 aa15.06■□□□□ 0
VARS2-201ENST00000321897 ELAVL2Q12926 359 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms